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| Status |
Public on Nov 07, 2017 |
| Title |
ChIP-chip analyses of PR- related pathway in human oncocytic thyroid tumor cell line XTC.UC1 |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by genome tiling array
|
| Summary |
ChIP-chip analyses of five transcription factors (ERR1, GABP, NRF1, CREB and YY1) PRC coactivator and RNA polymerase II in XTC.UC1 cells compared to non specific IP (IgG or input)
seven factors studied: ERR1, GABP, NRF1, CREB, YY1, PRC, RNAPolII
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| |
|
| Overall design |
10% of Serum induction for XTC.UC1 cells during 24h and 48h before ChIP chip analysis using antibodies against transcription factors , PRC transcriptionnal coactivator and RNApolymerase II
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| |
|
| Contributor(s) |
Savagner F, Houlgatte R |
| Citation(s) |
29662614 |
| Submission date |
Nov 06, 2017 |
| Last update date |
Apr 24, 2018 |
| Contact name |
Savagner Frederique |
| E-mail(s) |
frederique.savagner@inserm.fr
|
| Organization name |
Inserm
|
| Department |
UMR1048
|
| Street address |
Avenue Jean Poulhes
|
| City |
TOULOUSE |
| ZIP/Postal code |
31000 |
| Country |
France |
| |
|
| Platforms (1) |
| GPL8167 |
Agilent Human Promoter ChIP-on-Chip Set 244K, combined Microarray (slides 1 and 2) HG17 build |
|
| Samples (14)
|
| GSM2843729 |
ERR1 IP of XTC.UC1 cells after 24h serum induction-slide 1&2 |
| GSM2843730 |
ERR1 IP of XTC.UC1 cells after 48h serum induction-slide 1&2 |
| GSM2843731 |
GABP IP of XTC.UC1 cells after 24h serum induction-slide 1&2 |
| GSM2843732 |
GABP IP of XTC.UC1 cells after 48h serum induction-slide 1&2 |
| GSM2843733 |
NRF1 IP of XTC.UC1 cells after 24h serum induction-slide 1&2 |
| GSM2843734 |
NRF1 IP of XTC.UC1 cells after 48h serum induction-slide 1&2 |
| GSM2843735 |
CREB IP of XTC.UC1 cells after 24h serum induction-slide 1&2 |
| GSM2843736 |
CREB IP of XTC.UC1 cells after 48h serum induction-slide 1&2 |
| GSM2843737 |
YY1 IP of XTC.UC1 cells after 24h serum induction-slide 1&2 |
| GSM2843738 |
YY1 IP of XTC.UC1 cells after 48h serum induction-slide 1&2 |
| GSM2843739 |
PRC IP of XTC.UC1 cells after 24h serum induction-slide 1&2 |
| GSM2843740 |
PRC IP of XTC.UC1 cells after 48h serum induction-slide 1&2 |
| GSM2843741 |
RNAPolII IP of XTC.UC1 cells after 24h serum induction-slide 1&2 |
| GSM2843742 |
RNAPolII IP of XTC.UC1 cells after 48h serum induction-slide 1&2 |
|
| Relations |
| BioProject |
PRJNA417323 |
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