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| Status |
Public on Nov 08, 2017 |
| Title |
Expression data from CTCL patient skin lesion [Affymetrix] |
| Platform organism |
synthetic construct |
| Sample organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
|
| Summary |
Cutaneous T cell lymphoma (CTCL) can have clinical and histological features resembling benign inflammatory dermatosis (BID) and can be difficult to diagnose especially at the early stage of CTCL.
We used microarrays to detail the global alteration of miRNA transcriptome and generate a diagnosis and prognosis signature.
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| Overall design |
Patient skin biopsy samples were collected for RNA extraction and hybridization on Affymetrix microarrays. We pooled 3 samples per group into one Affeymetrix sample.
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| Contributor(s) |
Zheng J, Shen X |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| Submission date |
Nov 07, 2017 |
| Last update date |
Jul 27, 2018 |
| Contact name |
Jie Zheng |
| E-mail(s) |
bowang_shcn@hotmail.com
|
| Organization name |
Ruijin Hospital
|
| Department |
Dermatology
|
| Street address |
197 Ruijin Er Rd
|
| City |
Shanghai |
| ZIP/Postal code |
200025 |
| Country |
China |
| |
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| Platforms (1) |
| GPL16384 |
[miRNA-3] Affymetrix Multispecies miRNA-3 Array |
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| Samples (13)
|
| GSM2844409 |
Benign Inflammatory Dermatosis, biological rep 1_affymetrix |
| GSM2844410 |
Benign Inflammatory Dermatosis, biological rep 2_affymetrix |
| GSM2844411 |
Benign Inflammatory Dermatosis, biological rep 3_affymetrix |
| GSM2844412 |
Benign Inflammatory Dermatosis, biological rep 4_affymetrix |
| GSM2844413 |
CTCL early stage, biological rep 1_affymetrix |
| GSM2844414 |
CTCL early stage, biological rep 2_affymetrix |
| GSM2844415 |
CTCL early stage, biological rep 3_affymetrix |
| GSM2844416 |
CTCL advanced stage, biological rep 1_affymetrix |
| GSM2844417 |
CTCL advanced stage, biological rep 2_affymetrix |
| GSM2844418 |
CTCL advanced stage, biological rep 3_affymetrix |
| GSM2844419 |
CTCL other types, biological rep 1_affymetrix |
| GSM2844420 |
CTCL other types, biological rep 2_affymetrix |
| GSM2844421 |
CTCL other types, biological rep 3_affymetrix |
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| This SubSeries is part of SuperSeries: |
| GSE106646 |
Expression data from CTCL patient skin lesion |
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| Relations |
| BioProject |
PRJNA417499 |
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