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| Status |
Public on Nov 08, 2020 |
| Title |
Differential transcriptomes of developing zebrafish embryos from commencement to completion of gastrulation |
| Organism |
Danio rerio |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
We report differential transcriptomes of zebrafish embryos at 6 and 10 hours post fertilization. Specifically, we note a dramatic shift in the expression of genes involved in cellular metabolism from 6 to 10 hours post fertilization. This result may explain at least in part why metabolic demand of developing embryos at the examined stage is sharply increased.
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| Overall design |
Comparison of mRNA profiles of zebrafish embryos between 6 and 10 hour post fertilization by deep sequencing
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| Contributor(s) |
Choe S, Nam I, Kim Y, Bhandari S, Nogami J, Ohkawa Y |
| Citation missing |
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| Submission date |
Nov 09, 2017 |
| Last update date |
Nov 08, 2020 |
| Contact name |
Yasuyuki Ohkawa |
| E-mail(s) |
yohkawa@bioreg.kyushu-u.ac.jp
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| Organization name |
Medical Institute of Bioregulation
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| Lab |
Division of Transcriptomics
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| Street address |
3-1-1 Maidashi
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| City |
Fukuoka |
| ZIP/Postal code |
8128582 |
| Country |
Japan |
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| Platforms (2) |
| GPL14875 |
Illumina HiSeq 2000 (Danio rerio) |
| GPL18171 |
Illumina HiSeq 1500 (Danio rerio) |
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| Samples (3) |
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| Relations |
| BioProject |
PRJNA417777 |
| SRA |
SRP124713 |
