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Series GSE106830 Query DataSets for GSE106830
Status Public on Dec 31, 2019
Title Differential Gene Expression of Mucosal-Associated Invariant T Cells of HCC patients and Healthy Controls
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary The goal is to investigate whether the transcription profile of MAIT cells are changed in HCC tumors compared to normal livers.
 
Overall design MAIT cells were sorted out from primary tumors or tumor peripherals of HCC patients or healthy liver donors. These sorted cells were subjected to NGS to identify differentially expressed genes.
 
Contributor(s) Liu Y
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Nov 13, 2017
Last update date Dec 31, 2019
Contact name Yun Liu
E-mail(s) yliu39@fudan.edu.cn
Organization name Fudan University
Street address 130 Dong An Road
City Shanghai
ZIP/Postal code 200032
Country China
 
Platforms (1)
GPL20795 HiSeq X Ten (Homo sapiens)
Samples (8)
GSM2855002 HCC77-T
GSM2855003 HCC77-P
GSM2855004 HCC79-T
Relations
BioProject PRJNA418150
SRA SRP124855

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE106830_processed_gene_counts.csv.gz 460.5 Kb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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