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Series GSE107283 Query DataSets for GSE107283
Status Public on Jul 21, 2019
Title VDR ChIP-Seq on colonic human organoids
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Genome-wide maps of VDR binding sites in colonic organoids estimulated with calcitriol
 
Overall design Three independent VDR ChIP-Seq analysis of 3D stem cell enriched cultures of two different patients each stimulated with calcitriol/vehicle.
 
Contributor(s) Fernández-Barral A, Barbáchano A, Muñoz A, Costales-Carrera A
Citation(s) 31306552
Submission date Nov 22, 2017
Last update date Feb 03, 2020
Contact name Alba Costales
E-mail(s) albacostales@gmail.com
Phone 0034647906865
Organization name IIB
Department cancer genetics
Lab 231
Street address Arturo Duperier, 4
City madrid
State/province madrid
ZIP/Postal code 28029
Country Spain
 
Platforms (1)
GPL9052 Illumina Genome Analyzer (Homo sapiens)
Samples (11)
GSM2863692 ChIP5-vitD-Input
GSM2863693 ChIP5-control-Input
GSM2863694 ChIP5-vitD
Relations
BioProject PRJNA419552
SRA SRP125510

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE107283_RAW.tar 2.1 Gb (http)(custom) TAR (of BED, BEDGRAPH)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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