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Series GSE107591 Query DataSets for GSE107591
Status Public on Dec 01, 2017
Title The oncogenic role of circPVT1 in head and neck squamous cell carcinoma is mediated through the mutant p53/YAP/TEAD complex
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Background: circular RNAs are a class of endogenous RNAs with various functions in eukaryotic cells. Worthy of note, circular RNAs play a critical role in cancer. Currently, nothing is known about the role of circular RNAs in head and neck squamous cell carcinoma (HNSCC). The identification of circular RNAs in HNSCC might become useful for diagnostic and therapeutic strategies in HNSCC.
Results: Using samples from 115 HNSCC patients, we find that circPVT1 is over-expressed in tumors compared to matched non-tumoral tissues, with particular enrichment in patients with TP53 mutations. The circPVT1 up- and down-regulation determine, respectively, an increase and a reduction of the malignant phenotype in HNSCC cell lines. We show that circPVT1 expression is transcriptionally enhanced by the mut-p53/YAP/TEAD complex. CircPVT1 acts as an oncogene modulating the expression of miR-497-5p and genes involved in the control of cell proliferation.
Conclusions: This study shows the oncogenic role of circPVT1 in HNSCC, extending the current knowledge about the role of circular RNAs in cancer.
 
Overall design We show here Affymetrix profiling of 23 normal and 24 tumor tissues. To select miRNA-497-5p targets, we performed a correlation analysis between miRNA-497-5p expression [1] and mRNA expression analysis of 14 patients with TP53 mutations and 9 normal matched patients. [1] Ganci F, Sacconi A, Bossel Ben-Moshe N, Manciocco V, Sperduti I, Strigari L, et al. Expression of TP53 mutation-associated microRNAs predicts clinical outcome in head and neck squamous cell carcinoma patients. Ann Oncol. 2013;24:3082-088.
 
Contributor(s) Blandino G, Sacconi A
Citation(s) 29262850, 32967703
Submission date Dec 01, 2017
Last update date Oct 02, 2020
Contact name andrea sacconi
Organization name regina elena cancer institute
Street address via elio chianesi
City rome
ZIP/Postal code 00144
Country Italy
 
Platforms (1)
GPL6244 [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version]
Samples (47)
GSM2871752 68N
GSM2871753 73N
GSM2871754 73T
Relations
BioProject PRJNA420693

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE107591_RAW.tar 207.4 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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