|
| Status |
Public on Sep 30, 2008 |
| Title |
Validation Set for Prediction of Outcome in Adult Male Germ Cell Tumors |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
|
| Summary |
This series represents expression profiles of 34 non-seminoma germ cell tumors (NSGCTs) from patients who received cisplatin based chemotherarpy for treatment of their disease for whom full clinical follow-up information was available. These specimens were used as a validation set to test outcome prediction models using a subset of previously profiled GCT specimens (see GEO accession #GSE3218).
Keywords: Disease state analysis (good vs. poor patient outcome)
|
| |
|
| Overall design |
Tumor tissues were collected under IRB-approved protocols at the Memorial Sloan-Kettering Cancer Center, New York, between 1987 and 2003. The tumor samples consist of 34 NSGCT specimens. RNA was isolated, labeled, and hybridized to Affymetrix U133A and U133B microarrays using standard protocols. Data were processed by the RMA method.
|
| |
|
| Contributor(s) |
Korkola JE, Houldsworth J, Feldman D, Reuter VE, Bosl GJ, Chaganti R |
| Citation(s) |
19770384, 26624623 |
| Submission date |
Mar 11, 2008 |
| Last update date |
Jul 29, 2019 |
| Contact name |
James Korkola |
| E-mail(s) |
korkolaj@mskcc.org
|
| Phone |
212-639-8281
|
| Organization name |
Memorial Sloan-Kettering
|
| Department |
Cell Biology
|
| Lab |
Chaganti
|
| Street address |
1275 York Ave
|
| City |
New York |
| State/province |
NY |
| ZIP/Postal code |
10021 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL96 |
[HG-U133A] Affymetrix Human Genome U133A Array |
| GPL97 |
[HG-U133B] Affymetrix Human Genome U133B Array |
|
| Samples (68)
|
|
| Relations |
| BioProject |
PRJNA107469 |
Less...
More...