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Series GSE108103 Query DataSets for GSE108103
Status Public on Dec 01, 2020
Title Astrocytes respond to a reduction of extracellular Nerve Growth Factor levels by a phosphorylation of TrkA in the endoplasmic reticulum: a microarray transcriptome study
Organism Mus musculus
Experiment type Expression profiling by array
Summary The discovery that other cells besides neurons, like the glia cells, could respond to NGF and modulate the neuronal physiology broadened the possible NGF targets to potentially all the brain, boosting the comprehension of neuronal pathologies - like Alzheimer's disease - and supporting more therapeutical strategies. This microarray transcriptome analysis of primary astrocytes was performed to demonstrate a direct modulation of NGF activity on astrocyte cells. We investigated this modulation by neutralizing extracellular NGF by the alfaD11 monoclonal antibody and measuring the gene expression profile. Data analysis was performed using R-Bioconductor.
 
Overall design A total of n=8 samples were processed. The samples are divided into 3 experimental groups: anti-NGF alfaD11 antibody treated samples (n=4), naive cells control samples (n=2), anti-V5 antibody treated control samples (n=2). Samples were treated for 24h.
 
Contributor(s) Carucci N, Testa G, Gobbo F, Rizzi C, Galli-Resta L, Arisi I, D'Onofrio M, Brandi R, Capsoni S, Cattaneo A
Citation(s) 37143894
Submission date Dec 14, 2017
Last update date Aug 02, 2023
Contact name Ivan Arisi
E-mail(s) i.arisi@ebri.it
Phone +39-06-49255230
Organization name European Brain Research Institute
Department Bioinformatics Facility
Street address viale Regina Elena 295
City Roma
ZIP/Postal code 00161
Country Italy
 
Platforms (1)
GPL10787 Agilent-028005 SurePrint G3 Mouse GE 8x60K Microarray (Probe Name version)
Samples (8)
GSM2889529 astrocyte_alfaD11_24h 1
GSM2889530 astrocyte_alfaD11_24h 2
GSM2889531 astrocyte_CTR_Naive_24h 1
Relations
BioProject PRJNA422452

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE108103_RAW.tar 25.6 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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