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Series GSE109052 Query DataSets for GSE109052
Status Public on Jan 11, 2018
Title The satellite cell niche regulates the balance between myoblast differentiation and self-renewal via p53
Organism Mus musculus
Experiment type Expression profiling by array
Summary Satellite cells (SCs) are adult muscle stem cells residing in a specialised niche that regulates SC homeostasis. How niche-generated signals integrate to regulate gene expression in SC-derived myoblasts, is poorly understood. We undertook an unbiased approach to study the effect of the SC niche on SC-derived myoblast transcriptional regulation and identified the tumour suppressor p53 as a key player in the regulation of myoblast quiescence. After activation and proliferation, a subpopulation of myoblasts cultured in the presence of the niche upregulates p53 and fails to differentiate. When SC self-renewal is modelled ex vivo in a reserve cell assay, myoblasts treated with Nutlin-3, which increases p53 levels in the cell, fail to differentiate and instead become quiescent. Since both these effects of Nutlin-3 are rescued by siRNA-mediated p53 knockdown we conclude that a tight control of p53 levels in myoblasts regulate the balance between differentiation and return to quiescence.
 
Overall design Myofibres were extracted from Male mice and 48h and 72h after isolation collected washed and characterized on Agilent microarrays.
 
Contributor(s) Flamini V, Ghadiali RS, Antczak P, Rothwell A, Turnbull JE, Pisconti A
Citation(s) 29429962
Submission date Jan 10, 2018
Last update date Jun 26, 2019
Contact name Philipp Antczak
E-mail(s) p.antczak@liv.ac.uk
Organization name University of Liverpool
Street address Crown Street
City Liverpool
State/province Merseyside
ZIP/Postal code L69 7ZB
Country United Kingdom
 
Platforms (1)
GPL10787 Agilent-028005 SurePrint G3 Mouse GE 8x60K Microarray (Probe Name version)
Samples (16)
GSM2928579 4816_cRNA_1
GSM2928580 4816_cRNA_2
GSM2928581 4816_cRNA_3
Relations
BioProject PRJNA429482

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE109052_RAW.tar 191.2 Mb (http)(custom) TAR (of TXT)
GSE109052_processed_data.txt.gz 3.1 Mb (ftp)(http) TXT
Processed data are available on Series record

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