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Series GSE109147 Query DataSets for GSE109147
Status Public on May 20, 2019
Title Gene Expression Analysis of Dual-κ B cells in Lupus
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Autoreactive B cells expressing two different immunoglobulin light chains are present in elevated numbers in a subset of systemic lupus erythematosus patients and in MRL and MRL/lpr mouse models of lupus. Using RNAseq and genetic pathway analyses together with in vitro studies we demonstrate a role for TLR and IFN signaling in MRL/lpr dual-κ B cell expansion and/or activation. Dual-κ cells also showed increased expression of co-receptors used for T cell cognate interaction as well as enrichment of pathways involved in their signaling. Overall, our studies identify molecular pathways involved in the enrichment of dual-reactive effector B cells and reveal potential targets for their selective ablation in autoimmunity.
 
Overall design Examination of sorted single and dual-κ B cells from either the marginal zone or the follicles in the spleen of MRL/lpr lupus-prone mice.
 
Contributor(s) Sang A, Pelanda R, Danhorn T, O'Connor BP, Leach SM, Torres RM
Citation(s) 30266981
Submission date Jan 12, 2018
Last update date May 21, 2019
Contact name Roberta Pelanda
E-mail(s) Roberta.Pelanda@cuanschutz.edu
Phone 303-724-8666
Organization name University of Colorado Anschutz Medical Campus
Department Immunology&Microbiology
Street address 12800 East 19th Avenue
City Aurora
State/province CO
ZIP/Postal code 80045
Country USA
 
Platforms (1)
GPL18635 Ion Torrent Proton (Mus musculus)
Samples (12)
GSM2933064 FO single-κ rep1
GSM2933065 FO single-κ rep2
GSM2933066 FO single-κ rep3
Relations
BioProject PRJNA429777
SRA SRP129011

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Supplementary file Size Download File type/resource
GSE109147_genecounts.tar.gz 1.1 Mb (ftp)(http) TAR
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Raw data are available in SRA
Processed data are available on Series record

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