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Series GSE10949 Query DataSets for GSE10949
Status Public on Aug 27, 2009
Title Kidney-specific Dysfunction of the Organic Anion Transporter MRP2 (ABCC2): Functional Consequences for Renal Grafts
Organism Rattus norvegicus
Experiment type Expression profiling by array
Summary Transplanting renal allografts represents the major curative treatment of chronic renal failure. Despite recent advances in immunosuppressive therapy, long-term survival of allografts remains a major clinical problem. Kidney function depends in part on transport proteins such as MRP2 (ABCC2) which facilitates renal secretion of amphiphilic exogenous and endogenous compounds. Inherited variants of genes not related to the immune system have been shown to modify the outcome after renal transplantation. We investigated whether ABCC2 gene variants in the donor kidney affect renal graft function.
A congenic rat model was established carrying a single nucleotide deletion in the ABCC2 gene. Renal cross transplantations were performed with wild type rats. Renal excretion of the MRP2 substrates bilirubin glucuronide and p-aminohippuric acid, but not morphine-6-glucuronide, was affected by the donor genotype. Moreover, proteomic analyses and transcriptional profiling revealed modified expression patterns indicative of increased oxidative stress in renal grafts carrying the mutated gene.
In the clinical part our study, we assessed ABCC2 haplotypes in renal transplant patients and evaluated graft function. The 3563T>A gene polymorphism was significantly associated with delayed graft function. Together, both experimental and clinical data show that the ABCC2 genotype of the donor kidney affects renal graft function.
Keywords: dysfunction of organic anion transporter MRP2 (ABCC2)
 
Overall design Performed analyses of (6) wild-type and (6) MRP2 deficient kidneys that had been transplanted in wild-type recipients.
 
Contributor(s) Grisk O, Steinbach AC, Ciecholewski S, Schlüter T, Klöting I, Schmidt H, Dazert E, Schaeffeler E, Steil L, Gauer S, Jedlitschky G, Schwab M, Geisslinger G, Hauser IA, Völker U, Kroemer HK, Rettig R
Citation(s) 19214140
Submission date Mar 26, 2008
Last update date Jul 31, 2017
Contact name Sabine Ameling
Organization name Universitätsmedizin Greifswald
Department Interfakultäres Institut für Genetik und Funktionelle Genomforschung
Lab Funktionelle Genomforschung
Street address Jahnstraße 15a
City Greifswald
ZIP/Postal code 17487
Country Germany
 
Platforms (1)
GPL1355 [Rat230_2] Affymetrix Rat Genome 230 2.0 Array
Samples (12)
GSM277482 renal-cortex_wild-type recipent_wildtype graft_repl.1
GSM277483 renal-cortex_wild-type recipent_wildtype graft_repl.6
GSM277484 renal-cortex_wild-type recipent_wildtype graft_repl.9
Relations
BioProject PRJNA107143

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE10949_RAW.tar 31.0 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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