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Series GSE10950 Query DataSets for GSE10950
Status Public on Mar 29, 2008
Title Comparing gene expression in human colon tumor vs paired normal colon mucosa
Organism Homo sapiens
Experiment type Expression profiling by array
Summary 24 colon normal and tumor pairs using Illumina BeadChip Human Ref8-v2.

Genetic and epigenetic defects in Wnt/ß-catenin signaling play important roles in colorectal cancer progression. Here we identify DACT3, a member of the DACT (Dpr/Frodo) gene family, as a negative regulator of Wnt/ß-catenin signaling that is transcriptionally repressed in colorectal cancer. Unlike other Wnt signaling inhibitors that are silenced by DNA methylation, DACT3 repression is associated with bivalent histone modifications. Remarkably, DACT3 expression can be robustly de-repressed by a pharmacological combination that simultaneously targets both histone methylation and deacetylation, leading to strong inhibition of Dishevelled (Dvl)-mediated Wnt/ß-catenin signaling and massive apoptosis of colorectal cancer cells. Our study identifies DACT3 as an important regulator of Wnt/ß-catenin signaling in colorectal cancer and suggests a potential strategy for therapeutic control of Wnt/ß-catenin signaling in colorectal cancer.

The clinical information for the colon tumor is not available.
Keywords: human colon tumor
 
Overall design paired tumor vs. normal colon samples
 
Contributor(s) Yu Q
Citation(s) 18538736
Submission date Mar 26, 2008
Last update date Jan 18, 2013
Contact name qiang yu
E-mail(s) yuq@gis.a-star.edu.sg
Organization name GIS
Street address BIOPOLIS STREET
City SINGAPORE
ZIP/Postal code 138672
Country Singapore
 
Platforms (1)
GPL6104 Illumina humanRef-8 v2.0 expression beadchip
Samples (48)
GSM277495 Normal N1 (1690411082_A)
GSM277496 Primay tumor T1 (1690411082_B)
GSM277497 Normal N2 (1690411082_C)
This SubSeries is part of SuperSeries:
GSE10972 Colon cancer
Relations
BioProject PRJNA108789

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE10950_Primary_Tumor_nonorm_nobkgd_GEOarchive_Matrix.txt 27.0 Mb (ftp)(http) TXT
GSE10950_RAW.tar 3.4 Mb (http)(custom) TAR
Processed data included within Sample table

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