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Series GSE109699 Query DataSets for GSE109699
Status Public on Apr 25, 2020
Title Regulatory function of Pja2 mediated by the P2rx3/P2rx7 axis in mouse hippocampal neuronal cells
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary A member of the growing family of mammalian RING E3-ubiquitin ligases praja2 (Pja2) was reported to function not only in several types of cancer but also in the neurological diseases and disorders.
As a result, the expression of App, Mapt and Gsap could be inhibited by Pja2 overexpression and activated by the knockdown of Pja2. RNA sequencing (RNA-seq) was then used to evaluate and quantify the transcriptomes in response to the overexpression of Pja2 in mouse hippocampal neuronal HT-22 cells.
 
Overall design Inducible Pja2 in HT-22 cells were the treated samples and uninduced cells were used as controls. Experiments were performed in duplicate. Gene expression profiling analyses by high throughput sequencing were performed on mRNA samples isolated from the sense Pja2 in HT-22 cells (Pja2/+) and the wildtype cells.
 
Contributor(s) He K, Gong M
Citation(s) 32267716
Submission date Jan 26, 2018
Last update date Jun 22, 2021
Contact name Kan He
E-mail(s) hekan@ahu.edu.cn
Organization name Anhui University
Department School of life sciences
Lab Center for Stem Cell and Translational Medicine
Street address 111 Jiulong Road
City Hefei
State/province Anhui
ZIP/Postal code 230601
Country China
 
Platforms (1)
GPL21493 Illumina HiSeq 3000 (Mus musculus)
Samples (4)
GSM2948598 WT rep1
GSM2948599 WT rep2
GSM2948600 Pja2-pb rep1
Relations
BioProject PRJNA431744
SRA SRP131477

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE109699_gene_exp_with_symbol.txt.gz 549.2 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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