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Series GSE109847 Query DataSets for GSE109847
Status Public on Feb 01, 2019
Title Transcriptome analysis of lung epithelial cells from various developmental stages (E13.5, E15.5, E18.5, P14, and P56)
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We investigated whether cell transplantation potential differs between the different developmental stages of the lungs. We found that epithelial cells derived from different developmental stages show different engraftment potential. To identify transcriptional signatures of epithelial cells that are associated with the phenomenon, we performed a time series transcriptome analysis of epithelial cells of the developing lungs.
 
Overall design Lung epithelial cells from various developmental stages (E13.5, E15.5, E18.5, P14, and P56) were purified by cell sorting. The time series transcriptome of the epithelial cells was generated by 3'SAGE-seq using Ion Proton sequencer.
 
Contributor(s) Shiraishi K, Shichino S
Citation(s) 30639966, 30842492
Submission date Jan 30, 2018
Last update date Mar 20, 2019
Contact name Kazushige Shiraishi
Organization name The University of Tokyo
Department Graduate School of Medicine
Lab Molecular Preventive Medicine
Street address 7-3-1, Hongo, Bunkyo-ku
City Tokyo
ZIP/Postal code 113-0033
Country Japan
 
Platforms (1)
GPL18635 Ion Torrent Proton (Mus musculus)
Samples (7)
GSM2971221 E13.5_1
GSM2971222 E15.5_1
GSM2971223 E18.5_1
Relations
BioProject PRJNA432185
SRA SRP131777

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE109847_RAW.tar 830.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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