NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE110454 Query DataSets for GSE110454
Status Public on Feb 12, 2018
Title Whole methylome analysis of SEM cell lines
Organism Homo sapiens
Experiment type Methylation profiling by genome tiling array
Summary Genome-wide DNA methylation profiling of human B-ALL cell line SEM after 48 h incubation with DMSO (control), CX-4945 (Silmitasertib), Decitabine (DEC) or combined CX-4945 + DEC treatment. The Infinium MethylationEPIC BeadChip was used to obtain DNA methylation profiles across approximately 866,895 CpG islands.
 
Overall design Bisulfite treated DNA of 4 samples was hybridised to the Infinium MethylationEPIC BeadChip
 
Contributor(s) Roolf C, Richter A, Junghanss C, Hamed M, Gladbach Y, Fuellen G
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Feb 11, 2018
Last update date Jan 20, 2019
Contact name Catrin Roolf
Organization name Rostock university medical center
Street address Ernst-Heydemann-Str 6
City Rostock
ZIP/Postal code 18057
Country Germany
 
Platforms (1)
GPL21145 Infinium MethylationEPIC
Samples (4)
GSM2991436 SEM_DMSO_48h
GSM2991437 SEM_CX_48h
GSM2991438 SEM_DEC_48h
Relations
BioProject PRJNA433776

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE110454_RAW.tar 161.2 Mb (http)(custom) TAR
GSE110454_methylated_unmethylated_signal_intensities.txt.gz 48.6 Mb (ftp)(http) TXT
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap