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Series GSE110840 Query DataSets for GSE110840
Status Public on Oct 19, 2021
Title Sequencing of Caenorhabditis elegans deletion mutants treated with RNAi
Organism Caenorhabditis elegans
Experiment type Expression profiling by high throughput sequencing
Summary Comparison of gene expression profiles from C. elegans mutant strain CF1038 treated with L4440 and K02A4.1 RNAi and C. elegans mutant strain TU3311 treated with L4440 and B0412.2 RNAi for 5 days after L4 larvae stage.

Jena Centre for Systems Biology of Ageing - JenAge (www.jenage.de)

 
Overall design 12 samples in 4 groups: CF1038 - daf-16(mu86), bcat-1 (3 Samples); CF1038 - daf-16(mu86), L4440 (3 Samples); TU3311 (sid-1 tg; neuronal RNAi), daf-7 (3 Samples); TU3311 (sid-1 tg; neuronal RNAi), L4440 (3 Samples)
 
Contributor(s) Ristow M, Zarse K, Hühne R, Groth M, Platzer M
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Feb 20, 2018
Last update date Oct 19, 2021
Contact name JenAge Project
E-mail(s) geo-data@jenage.de
Organization name Leibniz Institute for Age Research - Fritz Lipmann Institute
Street address Beutenbergstr. 11
City Jena
ZIP/Postal code D-07745
Country Germany
 
Platforms (1)
GPL18245 Illumina HiSeq 2500 (Caenorhabditis elegans)
Samples (12)
GSM3017669 JM_FSU_RNA1307-2_all_RNSseq
GSM3017670 JM_FSU_RNA1307-4_all_RNSseq
GSM3017671 JM_FSU_RNA1307-6_all_RNSseq
Relations
BioProject PRJNA434683
SRA SRP133122

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE110840_sample_counts.xls.gz 1.2 Mb (ftp)(http) XLS
GSE110840_sample_rpkms.xls.gz 2.3 Mb (ftp)(http) XLS
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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