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Series GSE111242 Query DataSets for GSE111242
Status Public on Mar 01, 2018
Title Astrocyte mRNA expression - comparison of wild type animals to CETP transgenic animals
Organism Mus musculus
Experiment type Expression profiling by array
Summary CETP transfers lipids and cholesteryl esters between lipoproteins. This leads to elevated LDL-cholesterol levels. We found elevated cholesterol levels in the brains CETP transgenic animals. We wanted to test whether this is due to increased cholesterol synthesis by astrocytes
2 animals that were genotyped as wild type showed CETP transcription in our RT-qPCR (WT_1 & WT_5) and were excluded
 
Overall design purified astrocytes from wild type animals on a standard mouse diet are compared to astrocytes from CETP tansgenic animals on a 1% cholesterol diet (dietary cholesterol induced CETP expression)
 
Contributor(s) Oestereich F, Munter L
Citation(s) 35921880
Submission date Feb 28, 2018
Last update date Sep 27, 2022
Contact name Lisa Marie Munter
E-mail(s) lisa.munter@mcgill.ca
Organization name McGill University
Department Pharmacology
Lab Munter lab
Street address 3649 Prom. Sir-William-Osler
City Montreal
State/province Quebec
ZIP/Postal code H3G 0B1
Country Canada
 
Platforms (1)
GPL23038 [Clariom_S_Mouse] Affymetrix Clariom S Assay, Mouse (Includes Pico Assay)
Samples (7)
GSM3026996 Enriched astrocyte mRNA CETP_5
GSM3026997 Enriched astrocyte mRNA CETP_1
GSM3026998 Enriched astrocyte mRNA WT_2
Relations
BioProject PRJNA436339

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE111242_RAW.tar 9.4 Mb (http)(custom) TAR (of CEL, CHP)
GSE111242_fold_change_table.xls.gz 105.3 Kb (ftp)(http) XLS
Processed data included within Sample table
Processed data provided as supplementary file

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