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Series GSE11164 Query DataSets for GSE11164
Status Public on Sep 05, 2008
Title ISWI RNAi in Drosophila SL2 cells
Organism Drosophila melanogaster
Experiment type Expression profiling by array
Summary Profiling of changes in steady state RNA levels upon RNAi-mediated knockdown of the nucleosome remodeling ATPase ISWI in Drosophila SL2 cells.
Quantitation of the corresponding proteomes has been performed to describe transcriptome-proteome relations. The analysis indicates a limited correlation of the two expression steps.
Keywords: RNAi-mediated knockdown
 
Overall design Drosophila SL2 cells were incubated 7 days after treatment with 10 µg of dsRNA directed against GST or ISWI, respectively. 3 biological replicates per experimental conditions have been collected.
 
Contributor(s) Bonaldi T, Straub T, Kumar C, Cox J, Becker PB, Mann M
Citation(s) 18775334
Submission date Apr 14, 2008
Last update date Aug 28, 2018
Contact name Tobias Straub
E-mail(s) tstraub@med.uni-muenchen.de
Organization name LMU Munich
Department Biomedical Center, Bioinformatics
Street address Großhadener Str. 9
City Martinsried
ZIP/Postal code 82152
Country Germany
 
Platforms (1)
GPL1322 [Drosophila_2] Affymetrix Drosophila Genome 2.0 Array
Samples (6)
GSM281626 SL2-GST-replicate1
GSM281627 SL2-GST-replicate2
GSM281628 SL2-GST-replicate3
Relations
BioProject PRJNA106855

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SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE11164_RAW.tar 11.6 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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