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Series GSE111673 Query DataSets for GSE111673
Status Public on Mar 07, 2021
Title RNA-seq of glioma patient-derived xenografts treated by DMSO or LY2109761
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We employed the patient-derived xenografts (PDX) model to test the efficiency of LY2109761 in vivo. The drug was intraperitoneally administered, and the mice were sacrificed on the 31st day. The tumors were excised and subjected to RNA-seq. All groups had similar expression density distributions. Hierarchical clustering showed that the same processing groups had the closest distances.
 
Overall design Examination of differential expressive genes in glioma tissues from PDX treated by DMSO or LY2109761.
 
Contributor(s) Wang Q, Cai J, Zhang J, Kang C
Citation(s) 30279734
Submission date Mar 12, 2018
Last update date Jun 07, 2021
Contact name Jinquan Cai
E-mail(s) caijinquan666777@126.com
Organization name Harbin Medical University
Street address Xuefu Road
City Harbin
ZIP/Postal code 150086
Country China
 
Platforms (1)
GPL23227 BGISEQ-500 (Homo sapiens)
Samples (8)
GSM3036912 MCH_PDX_CTRL_1 (RNA-seq)
GSM3036913 MCH_PDX_CTRL_2 (RNA-seq)
GSM3036914 MCH_PDX_LY_1_1 (RNA-seq)
This SubSeries is part of SuperSeries:
GSE111676 Mesenchymal glioblastoma constitutes a major ceRNA signature in the TGF-Beta pathway
Relations
BioProject PRJNA437856
SRA SRP134909

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE111673_RAW.tar 15.6 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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