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Series GSE113568 Query DataSets for GSE113568
Status Public on Apr 25, 2018
Title Next Generation Sequencing Facilitates Quantitative Transcriptomes Analysis of Smyd4 Downregulation HL-1 Cells By shRNA
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary The mRNA profiles of control cells and cells of Smyd4 downregulation by shRNA were generated by deep sequencing.
 
Overall design The mRNA profiles of control cells and cells of Smyd4 downregulation were generated by deep sequencing using illumina
 
Contributor(s) Xiao D, Ma D
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Apr 24, 2018
Last update date Mar 01, 2019
Contact name deyong xiao
E-mail(s) xiaodeyongerik@163.com
Organization name Fudan university
Street address Room 308, Mingdao building, Research Center For Birth Defects, School of Basic Medical Sciences, Fudan University, 130 Dongan Road, Shanghai , China
City Shanghai
ZIP/Postal code 200030
Country China
 
Platforms (1)
GPL21273 HiSeq X Ten (Mus musculus)
Samples (6)
GSM3109200 HL-1 CTR-1
GSM3109201 HL-1 CTR-2
GSM3109202 HL-1 CTR-3
Relations
BioProject PRJNA453119
SRA SRP142426

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE113568_FPKM.txt.gz 1.0 Mb (ftp)(http) TXT
GSE113568_ShRNAvsControl_DEG_ALL.txt.gz 653.0 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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