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Series GSE114322 Query DataSets for GSE114322
Status Public on Oct 04, 2021
Title Gene expression analysis of spleens from virus-infected rats
Organism Rattus norvegicus
Experiment type Expression profiling by high throughput sequencing
Summary Comparison of gene expression between wildtype (WT) and Ifnar1 ko rats following Kilham rat virus (KRV) challenge
 
Overall design Uninfected WT or Ifnar1 ko rat spleens (n=2 each group), KRV-infected WT or Ifnar1 ko rat spleens (n=4 each group)
 
Contributor(s) Qaisar N, Wang JP, Racicot R, Satish B
Citation(s) 34702762
Submission date May 10, 2018
Last update date May 26, 2022
Contact name Alper Kucukural
E-mail(s) alper.kucukural@umassmed.edu
Phone 7743124493
Organization name UMass Medical School
Department Program in Molecular Medicine
Lab Biocore
Street address 364 Plantation Street
City Worcester
State/province MA
ZIP/Postal code 01605
Country USA
 
Platforms (1)
GPL20084 Illumina NextSeq 500 (Rattus norvegicus)
Samples (12)
GSM3139535 KRV-Ifnar1 ko S12
GSM3139536 KRV-Ifnar1 ko S5
GSM3139537 KRV-Ifnar1 ko S9
Relations
BioProject PRJNA470952
SRA SRP145363

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE114322_genes_expression_expected_count.tsv.gz 432.3 Kb (ftp)(http) TSV
GSE114322_genes_expression_tpm.tsv.gz 501.5 Kb (ftp)(http) TSV
GSE114322_isoforms_expression_expected_count.tsv.gz 458.8 Kb (ftp)(http) TSV
GSE114322_isoforms_expression_tpm.tsv.gz 516.2 Kb (ftp)(http) TSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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