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| Status |
Public on Dec 02, 2020 |
| Title |
Comparison of WT to atfs-1(null) & WT to atfs-1(et18) in C. elegans by deep sequencing |
| Organism |
Caenorhabditis elegans |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
Comparison of gene change in the atfs-1 (null) to WT.
Comparison of gene change in the atfs-1 (et18) to WT.
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| Overall design |
We performed two experiments. In the first experiment, we collected 3 samples of N2 and 3 samples of atfs-1(null). In the second experiment, we collected 3 samples of N2 and 3 samples of atfs-1(et18).
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| Contributor(s) |
Shpilka T, Du Y, Lavelle J, Zhu L |
| Citation(s) |
33473112 |
| Submission date |
May 25, 2018 |
| Last update date |
Feb 02, 2021 |
| Contact name |
Julie Zhu |
| E-mail(s) |
julie.zhu@umassmed.edu
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| Phone |
5088565377
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| Organization name |
UMass Medical School
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| Department |
Molecular Cellular and Cancer Biology
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| Street address |
364 Plantation Street
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| City |
Worcester |
| State/province |
MA |
| ZIP/Postal code |
01605 |
| Country |
USA |
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| Platforms (1) |
| GPL13657 |
Illumina HiSeq 2000 (Caenorhabditis elegans) |
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| Samples (12)
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| Relations |
| BioProject |
PRJNA473173 |
| SRA |
SRP149010 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE114951_featureCounts.txt.gz |
2.0 Mb |
(ftp)(http) |
TXT |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
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