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Series GSE115451 Query DataSets for GSE115451
Status Public on Jan 30, 2020
Title Expression and transcript isoform profiling of reprogramming cells expressing a Sox2 mutant lacking a putative RNA binding motif [RNA-Seq]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Total RNA was extracted at different stages of somatic cell reprogramming of OG2-MEFs to induced pluripotent stem cells to analyse the effect of a Sox2 mutant lacking a putative RNA binding motif on genes expression and post-transcriptional processing
 
Overall design Expression profiling by high throughput sequencing of reprogramming cells.
 
Contributor(s) Lai Y, Wei Y
Citation(s) 32016422
Submission date Jun 07, 2018
Last update date Apr 20, 2020
Contact name Yiwei Lai
E-mail(s) lai_yiwei@gibh.ac.cn
Organization name Guangzhou Institutes of Biomedicine and Health,Chinese Academy of Sciences
Department South China Institute for Stem Cell Biology and Regenerative Medicine Key Laboratory of Regenerative Biology, CAS
Lab Miguel
Street address 190 Kai Yuan Avenue, Science Park
City Guangzhou
State/province Guangdong
ZIP/Postal code 510530
Country China
 
Platforms (1)
GPL21273 HiSeq X Ten (Mus musculus)
Samples (18)
GSM3178498 D12_SOX2_WT_rep1
GSM3178499 D12_SOX2_WT_rep2
GSM3178500 D12_SOX2_delta(120-180)_rep1
This SubSeries is part of SuperSeries:
GSE115452 Expression and transcript isoform profiling of reprogramming cells expressing a Sox2 mutant lacking a putative RNA binding motif
Relations
BioProject PRJNA475064
SRA SRP149979

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE115451_D12Sox2vsD12dHMG_output.tar.gz 4.4 Mb (ftp)(http) TAR
GSE115451_D12_Sox2_WT_vs_D12_Sox2_delta_120-180_output.tar.gz 3.8 Mb (ftp)(http) TAR
GSE115451_D4Sox2vsD4dHMG_output.tar.gz 4.1 Mb (ftp)(http) TAR
GSE115451_D4_Sox2_WT_vs_D4_Sox2_delta_120-180_output.tar.gz 3.7 Mb (ftp)(http) TAR
GSE115451_D8Sox2vsD8dHMG_output.tar.gz 3.8 Mb (ftp)(http) TAR
GSE115451_D8_Sox2_WT_vs_D8_Sox2_delta_120-180_output.tar.gz 3.3 Mb (ftp)(http) TAR
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Raw data are available in SRA
Processed data are available on Series record

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