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Series GSE115618 Query DataSets for GSE115618
Status Public on Jun 12, 2018
Title Comparison of global gene expression in homeostatic and regenerating endothelium of the adult mouse aorta
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We report the global transcript levels in an endothelial-enriched cell fraction from homeostatic and regenerating mouse aorta. These data provide insight into the molecular regulation of endothelial lining regenerating inside a large artery.
 
Overall design Total RNA-seq comparing global gene expression in 4 conditions: 1) uninjured aorta segment 48 hours post-wound 2) endothelial fraction regenerating aorta 3 hours post-wound 3) endothelial fraction regenerating aorta 48 hours post-wound 4) tissue fraction of regenerating aorta 48 hours post-wound
 
Contributor(s) McDonald AI, Ma F, Iruela-Arispe ML
Citation(s) 30075129, 30273401
Submission date Jun 11, 2018
Last update date Feb 11, 2019
Contact name Feiyang Ma
Organization name UCLA
Department Molecular Biology Institute
Lab Pellegrini Lab
Street address 610, Charles Young Dr East, TLSB 3000C
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platforms (1)
GPL21493 Illumina HiSeq 3000 (Mus musculus)
Samples (26)
GSM3185086 Abdominal Aorta (Injured) 48HR Experimental Batch 1 MouseID E1A
GSM3185087 Abdominal Aorta (Injured) 48HR Experimental Batch 1 MouseID E1B
GSM3185088 Abdominal Aorta (Injured) 48HR Experimental Batch 1 MouseID E1C
Relations
BioProject PRJNA475571
SRA SRP150243

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE115618_normalized_counts_and_comparisons.xlsx.gz 22.7 Mb (ftp)(http) XLSX
GSE115618_raw_count_matrix.xlsx.gz 2.2 Mb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record
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