|
| Status |
Public on Aug 30, 2018 |
| Title |
Transcriptome analysis reveals non-foamy rather than foamy plaque macrophages are pro-inflammatory in atherosclerotic murine models |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
30359200 |
| Submission date |
Jun 26, 2018 |
| Last update date |
Mar 19, 2019 |
| Contact name |
Maxim Artyomov |
| E-mail(s) |
martyomov@wustl.edu
|
| Organization name |
WASHINGTON UNIVERSITY IN ST LOUIS
|
| Department |
Pathology & Immunology
|
| Lab |
Artyomov lab
|
| Street address |
425 S Euclid Ave
|
| City |
St. Louis |
| State/province |
Missouri |
| ZIP/Postal code |
63110 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL21103 |
Illumina HiSeq 4000 (Mus musculus) |
| GPL21493 |
Illumina HiSeq 3000 (Mus musculus) |
|
| Samples (8)
|
| GSM3215429 |
Foam intimal macrophages rep 1 (Bulk RNA-seq) |
| GSM3215430 |
Foam intimal macrophages rep 2 (Bulk RNA-seq) |
| GSM3215431 |
Foam intimal macrophages rep 3 (Bulk RNA-seq) |
| GSM3215432 |
Non-foam intimal macrophages rep 1 (Bulk RNA-seq) |
| GSM3215433 |
Non-foam intimal macrophages rep 2 (Bulk RNA-seq) |
| GSM3215434 |
Non-foam intimal macrophages rep 3 (Bulk RNA-seq) |
| GSM3215435 |
Total leukocytes from Ldlr -/- aorta (Single cell RNA-seq) |
| GSM3215436 |
Total foam cells from ApoE -/- aorta (Single cell RNA-seq) |
|
| This SuperSeries is composed of the following SubSeries: |
| GSE116239 |
Bulk RNA-seq of foamy and non-foamy intimal macrophages from ApoE -/- mouse |
| GSE116240 |
Single cell RNA sequencing of aortic CD45+ cells and foam cells from atherosclerotic aorta |
|
| Relations |
| BioProject |
PRJNA477941 |
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