NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE116408 Query DataSets for GSE116408
Status Public on Aug 08, 2018
Title Gene expression of NonA RNAi knockdown in dvpdf cells in Drosophila
Organism Drosophila melanogaster
Experiment type Expression profiling by high throughput sequencing
Summary We downregulated NonA in dvpdf cells by RNAi. 50-100 GFP-labeled dvpdf cells from 50-60 fly brians were manually isolated. mRNA sequecing libraries were prepared according to Nagoshi et al 2010, Abruzzi et al 2016.
 
Overall design Examination of gene expression in Drosophila dvpdf cells.
 
Contributor(s) Luo W
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jun 28, 2018
Last update date Jan 23, 2019
Contact name weifei luo
E-mail(s) wluo@brandeis.edu
Phone 781-736-3163
Organization name Brandeis University
Department Department of Biology
Lab Rosbash
Street address 415 South st
City waltham
State/province MA
ZIP/Postal code 02454
Country USA
 
Platforms (1)
GPL13304 Illumina HiSeq 2000 (Drosophila melanogaster)
Samples (4)
GSM3231168 Dvpdf_con_REP1_expressions
GSM3231169 Dvpdf_con_REP2_expressions
GSM3231170 Dvpdf_nonaRNAi_REP1_expressions
Relations
BioProject PRJNA478424
SRA SRP151586

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE116408_RAW.tar 680.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap