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Series GSE116552 Query DataSets for GSE116552
Status Public on Jul 03, 2018
Title RELMa induced differential gene expression in CD11c+ cells
Organism Mus musculus
Experiment type Expression profiling by array
Summary Mouse lung CD11c+ cell gene expression changes following recombinant RELMa treatment
 
Overall design RELMa-/- mice were infected with 500 L3 of Nippostrongylus brasiliensis worms and sacrificed at day 10 post infection. Lungs were collected, dissociated and sorted for CD11c+ cells. Cells were plated overnight at 37 deg C in 10% serum media. Cells were serum starved in 1% serum media for 2 hour and treated with 500ng/ml recombinant RELMa or PBS control. Cells were lysed with lysis buffer and an volume equivalent to 1000 cells per microliter was frozen at -80 deg C for NanoString analysis. Five microliter of each sample (~5000 cells) was applied to NanoString.
 
Contributor(s) Nair MG
Citation(s) 29992625
Submission date Jul 02, 2018
Last update date Oct 09, 2018
Contact name Meera Goh Nair
E-mail(s) Meera.Nair@medsch.ucr.edu
Phone 951-827-7734
Organization name University of California Riverside
Department Division of Biomedical Sciences
Street address 301 School of Medicine Research Building, 900 University Avenue,
City Riverside
State/province CA
ZIP/Postal code 92521
Country USA
 
Platforms (1)
GPL25266 NanoString Mouse nCounter Myeloid Innate Immunity Panel NS_Mm_Myeloid_V2.0
Samples (12)
GSM3242641 Run1_rRELMa_1
GSM3242642 Run1_rRELMa_2
GSM3242643 Run1_rRELMa_3
Relations
BioProject PRJNA478997

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE116552_Matrix_Run1_Samples.txt.gz 44.2 Kb (ftp)(http) TXT
GSE116552_Matrix_Run2_Samples.txt.gz 45.0 Kb (ftp)(http) TXT
GSE116552_RAW.tar 110.0 Kb (http)(custom) TAR (of RCC)
Processed data included within Sample table
Processed data are available on Series record

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