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| Status |
Public on Jul 10, 2018 |
| Title |
A robust qualitative transcriptional signature for the early diagnosis of gastric cancer |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Pathological examination of gastroscopy biopsy specimens will make false diagnosis for gastric cancer (GC) due to inaccurate sampling locations and/or insufficient sampling amount. We extracted a robust qualitative transcriptional signature, based on the within-sample relative expression orderings (REOs) of gene pairs, to discriminate both GC tissues and adjacent-normal tissues from non-GC gastritis and normal gastric tissues.The qualitative transcriptional signature can be robustly applied at the individual level to aid the diagnosis of early GC.
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| Overall design |
Examination of 21 GC specimens from seven GC patients. For each patient, three specimens were sampled from three different tumor locations.
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| Contributor(s) |
Yan H, Li M |
| Citation(s) |
30819200 |
| Submission date |
Jul 09, 2018 |
| Last update date |
Mar 20, 2019 |
| Contact name |
Li meifeng |
| E-mail(s) |
1097128709@qq.com
|
| Organization name |
Fujian medical university
|
| Street address |
xueyuan road
|
| City |
FuZhou |
| ZIP/Postal code |
350108 |
| Country |
China |
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| Platforms (1) |
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| Samples (21)
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| Relations |
| BioProject |
PRJNA480243 |
| SRA |
SRP152822 |
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