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Series GSE116835 Query DataSets for GSE116835
Status Public on Sep 29, 2020
Title Expression data from human whole blood of propionate treated MS patients
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Short chain fatty acids were shown to affect regulatory immune response in context of autoimmune diseases like multiple sclerosis (MS). Recent studies in an animal model of MS revealed significant impact of short chain fatty acid propionate (PA) on the differentiation towards regulatory Tcells (Treg). In a translational proof of concept study, PA was administered to relapse remitting MS patients. We observed an increase of Treg in peripheral blood as well as functional improvement in Treg suppressive capacity beside a decrease of proinflammatory Thelper1 and 17 cells.
To investigate underlying mechanisms of the observed shift in immune cell balance, intensive transcriptomic analysis on whole blood of PA treated relapse remitting MS patients was performed.
 
Overall design PA was supplemented on daily basis in four relapse remitting MS patients for 14 days. Blood was collected in BD PaxGene tubes for RNA isolation and subsequent microarray analysis to compare baseline and 14 days of treatment.
 
Contributor(s) Haghikia A, Duscha A, Staszewski O
Citation(s) 32160527
Submission date Jul 09, 2018
Last update date Sep 29, 2020
Contact name Ori Staszewski
E-mail(s) ori.staszewski@uniklinik-freiburg.de
Organization name University Medical Center Freiburg
Department Institute of Neuropathology
Street address Breisacher Str. 64
City Freiburg
ZIP/Postal code D-79106
Country Germany
 
Platforms (1)
GPL23159 [Clariom_S_Human] Affymetrix Clariom S Assay, Human (Includes Pico Assay)
Samples (8)
GSM3262488 blood_ctrl_P67
GSM3262489 blood_treated_P67
GSM3262490 blood_ctrl_P68
Relations
BioProject PRJNA480316

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE116835_RAW.tar 8.3 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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