|
| Status |
Public on Jul 28, 2018 |
| Title |
Prevalence of long RNA Duplexes in Human Model Cell Lines |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We present a novel transcriptome-wide experimental approach based on sequencing RNA fragments longer than 18 nts in order to detect accessible RNA duplexes
|
| |
|
| Overall design |
The prevalence of RNA duplexes that are not degraded by single-strand cutting enzymes is ascertained for 4 human model cell lines with respect to different treatments.
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| |
|
| Contributor(s) |
Dai L, Bindewald E, Kasprzak W, Kim T, Gu S, Shapiro BA |
| Citation(s) |
30558267 |
| Submission date |
Jul 27, 2018 |
| Last update date |
Feb 15, 2019 |
| Contact name |
Bruce Shapiro |
| E-mail(s) |
shapirbr@mail.nih.gov
|
| Organization name |
National Cancer Institute
|
| Lab |
RNA Biology Laboratory
|
| Street address |
Building 560/Room 11-83
|
| City |
Frederick |
| State/province |
Maryland |
| ZIP/Postal code |
21702 |
| Country |
USA |
| |
|
| Platforms (1) |
|
| Samples (15)
|
|
| Relations |
| BioProject |
PRJNA483236 |
| SRA |
SRP155564 |
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