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| Status |
Public on Dec 04, 2018 |
| Title |
Transcriptional response to PORCN inhibition using an orthotopic model of RNF43 mutant pancreatic adenocarcinoma (HPAF-II) |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
Timecourse RNA-seq of response to PORCN inhibition, using ETC-159, in an orthotopic model of RNF43 mutant pancreatic adenocarcinoma (HPAF-II).
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| Overall design |
Timecourse to investigate drug response in an orthotopic model of RNF43 mutant PDAC. RNA-seq performed at multiple timepoints (0 hrs, 3 hrs, 8 hrs, 16 hrs, 32 hrs, 56 hrs and 7 days)
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| Contributor(s) |
Harmston N, Madam B, Petretto E, Virshup DM |
| Citation(s) |
30300142, 33092630 |
| BioProject |
PRJNA448521 |
| Submission date |
Aug 02, 2018 |
| Last update date |
Oct 27, 2020 |
| Contact name |
NATHAN HARMSTON |
| E-mail(s) |
harmstonn@cardiff.ac.uk
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| Organization name |
Cardiff University
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| Street address |
Museum Avenue
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| City |
Cardiff |
| ZIP/Postal code |
CF10 3AX |
| Country |
United Kingdom |
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| Platforms (1) |
| GPL21290 |
Illumina HiSeq 3000 (Homo sapiens) |
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| Samples (43)
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| Relations |
| SRA |
SRP136994 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE118041_RAW.tar |
59.2 Mb |
(http)(custom) |
TAR (of TXT) |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data provided as supplementary file |
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