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Series GSE118531 Query DataSets for GSE118531
Status Public on May 25, 2020
Title CCR7L-inducible lnc-Dpf3 restrains dendritic cell migration by inhibiting HIF1α-mediated glycolysis (mRNA)
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Purpose: The purpose is to systemically identify RNA expression changes after lnc-Dpf3 knockdown in CCR7-stimulated mDCs
Methods: We profiled RNA seq in mDCs transfected with si-Lnc-Dpf3 or si-NC and stimulated with or without CCR7 ligand CCL19 and CCL21.
Results: CCR7 stimulation induced profound RNA expression changes in mDCs, and a set of genes were differentially expressed in lnc-Dpf3-knockdown DC
 
Overall design mDCs were transfected with si-Lnc-Dpf3 or si-NC and stimulated with or without CCR7 ligand CCL19 and CCL21 (CCR7L) for 12 h or left unstimulated (Med), and then subjected to RNA seq
 
Contributor(s) Cao X, Liu J
Citation(s) 30824325
Submission date Aug 14, 2018
Last update date May 25, 2020
Contact name kun chen
E-mail(s) kunc109727@163.com
Phone +8615900809470
Organization name Zhejiang University
Street address No.800 Xiangyin Road, Yangpu District
City shanghai
ZIP/Postal code 200433
Country China
 
Platforms (1)
GPL23479 BGISEQ-500 (Mus musculus)
Samples (4)
GSM3332064 si-NC/Med
GSM3332065 si-NC/CCR7L
GSM3332066 si-Lnc-Dpf3/Med
Relations
BioProject PRJNA485962
SRA SRP157908

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SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE118531_RNASEQ.txt.gz 677.5 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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