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| Status |
Public on Sep 12, 2019 |
| Title |
Transcriptomic analysis of Fusobacterium nucleatum-stimulated Human gingival fibroblasts |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
To better understand the global responses of GFs to F. nucleatum infection along the time sequence, we performed a genome-wide transcriptome analysis by RNA-sequencing technology to determine the global changes on gene expression level
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| Overall design |
54 samples from 5 individuals (each individual involved 1 sample at time point 0h, 5 control samples at 2h 6h, 12h, 24h and 48h with no F. nucleatum treatment, and 5 experimental samples with F. nucleatum (F. nucleatum:cell=100:1) treatment at the same time point, one treated sample at time point 12h failed to extract sufficient RNA) were sequenced to analysis the whole gene expression level
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| |
|
| Contributor(s) |
Feng Q, Kang W |
| Citation(s) |
31608279, 31737164 |
| Submission date |
Aug 17, 2018 |
| Last update date |
Nov 25, 2019 |
| Contact name |
Wenyan Kang |
| E-mail(s) |
202090000024@sdu.edu.cn
|
| Organization name |
Shandong university
|
| Street address |
No. 44-1 Wenhua Road West
|
| City |
Jinan, Shandong |
| ZIP/Postal code |
250012 |
| Country |
China |
| |
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| Platforms (1) |
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| Samples (54)
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| Relations |
| BioProject |
PRJNA486466 |
| SRA |
SRP158251 |
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