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Series GSE118857 Query DataSets for GSE118857
Status Public on Dec 31, 2019
Title HMGA2 regulates ATF4 and the serine biosynthesis genes and reprograms metabolism in breast cancer
Organism Homo sapiens
Experiment type Expression profiling by array
Summary The transcription regulator High Mobility Group AT-Hook 2 (HMGA2) plays an important role in many types of cancers, but the molecular mechanisms are not fully elucidated. We found by knock-down studies that HMGA2 controls expression of ATF4 and the enzymes in the serine synthesis pathway in triple negative breast cancer cells, and that HMGA2 expression correlates with poor clinical outcome in ER negative breast cancers. Furthermore, we found that the metabolism was dysregulated in cells with reduced HMGA2 expression, which affected their response to mitochondrial stressors and to changed carbon sources. Altogether, our findings demonstrate that HMGA2 is a regulator of serine biosynthesis and metabolism, consistent with the well-known role of HMGA2 as a regulator of proliferation, epithelial-mesenchymal transition and stemness.
 
Overall design Investigation of HMGA2 functions.
 
Contributor(s) Munthe E, Grad I, Serguienko A, Rosvold ME, Sandhu V, Kure EH, Stratford EW, Meza-Zepeda LA, Mani SA, Myklebost O
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Submission date Aug 21, 2018
Last update date Jan 01, 2020
Contact name Leonardo A. Meza-Zepeda
E-mail(s) L.A.Meza-Zepeda@ous-research.no
Phone +47-99035706
Organization name Oslo University Hospital
Department Department of Tumor Biology
Lab Meza-Zepeda
Street address Ullernchausseen 70
City Oslo
ZIP/Postal code 0310
Country Norway
 
Platforms (1)
GPL6884 Illumina HumanWG-6 v3.0 expression beadchip
Samples (6)
GSM3349296 MDA-MB-231 not transfected replicate 1
GSM3349297 MDA-MB-231 not transfected, replicate 2
GSM3349298 HMGA2 siRNA, replicate 1
Relations
BioProject PRJNA487053

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE118857_RAW.tar 6.3 Mb (http)(custom) TAR
GSE118857_non-normalized.txt.gz 2.1 Mb (ftp)(http) TXT
Processed data included within Sample table

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