GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Series GSE118972
Query DataSets for GSE118972
Status
Public on Feb 28, 2019
Title
Defining UHRF1 Domains That Support Maintenance of Human Colon Cancer DNA Methylation and Oncogenic Properties
Organism
Homo sapiens
Experiment type
Expression profiling by array
Methylation profiling by array
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
30956060
Submission date
Aug 23, 2018
Last update date
Apr 18, 2019
Contact name
Wenbing Xie
E-mail(s)
wxie6@jhmi.edu
Organization name
The Sidney Kimmel Comprehensive Cancer Center at Johns Hopkins, The Johns Hopkins University School of Medicine
Department
Department of Oncology
Lab
Stephen B. Baylin
Street address
1650 Orleans Street, CRB1, Room 530
City
Baltimore
State/province
MD
ZIP/Postal code
21205
Country
USA
Platforms (2)
GPL10332
Agilent-026652 Whole Human Genome Microarray 4x44K v2 (Feature Number version)
GPL21145
Infinium MethylationEPIC
Samples (50)
Less...
More...
GSM3355138
genomic DNA from HCT_Mock
GSM3355139
genomic DNA from HCT_EV
GSM3355140
genomic DNA from HCT_WT
GSM3355141
genomic DNA from HCT_Y188A
GSM3355142
genomic DNA from HCT_DAEA
GSM3355143
genomic DNA from HCT_G448D
GSM3355144
genomic DNA from HCT_YATA
GSM3355145
genomic DNA from HCT_R491A
GSM3355146
genomic DNA from HCT_H741A
GSM3355147
genomic DNA from HCT_H3 mut
GSM3355148
genomic DNA from HCT_H3-Hemi DNA mut
GSM3355149
genomic DNA from RKO_Mock
GSM3355150
genomic DNA from RKO_EV
GSM3355151
genomic DNA from RKO_WT
GSM3355152
genomic DNA from RKO_Y188A
GSM3355153
genomic DNA from RKO_DAEA
GSM3355154
genomic DNA from RKO_G448D
GSM3355155
genomic DNA from RKO_YATA
GSM3355156
genomic DNA from RKO_R491A
GSM3355157
genomic DNA from RKO_H741A
GSM3355158
genomic DNA from RKO_H3 mut
GSM3355159
genomic DNA from RKO_H3-Hemi DNA mut
GSM3355160
genomic DNA from 3A(-/-)3B(-/-)MT1(+/-)_Mock
GSM3355161
genomic DNA from 3A(-/-)3B(-/-)MT1(+/-)_EV
GSM3355162
genomic DNA from 3A(-/-)3B(-/-)MT1(+/-)_WT
GSM3355163
genomic DNA from 3A(-/-)3B(-/-)MT1(+/-)_Y188A
GSM3355164
genomic DNA from 3A(-/-)3B(-/-)MT1(+/-)_DAEA
GSM3355165
genomic DNA from 3A(-/-)3B(-/-)MT1(+/-)_G448D
GSM3355166
genomic DNA from 3A(-/-)3B(-/-)MT1(+/-)_R491A
GSM3355167
genomic DNA from 3A(-/-)3B(-/-)MT1(+/-)_H741A
GSM3355168
total RNA from HCT_EV
GSM3355169
total RNA from HCT_WT
GSM3355170
total RNA from HCT_Y188A
GSM3355171
total RNA from HCT_DAEA
GSM3355172
total RNA from HCT_G448D
GSM3355173
total RNA from HCT_YATA
GSM3355174
total RNA from HCT_R491A
GSM3355175
total RNA from HCT_H741A
GSM3355176
total RNA from HCT_H3 mut
GSM3355177
total RNA from HCT_H3-Hemi DNA mut
GSM3355178
total RNA from RKO_EV
GSM3355179
total RNA from RKO_WT
GSM3355180
total RNA from RKO_Y188A
GSM3355181
total RNA from RKO_DAEA
GSM3355182
total RNA from RKO_G448D
GSM3355183
total RNA from RKO_YATA
GSM3355184
total RNA from RKO_R491A
GSM3355185
total RNA from RKO_H741A
GSM3355186
total RNA from RKO_H3 mut
GSM3355187
total RNA from RKO_H3-Hemi DNA mut
This SuperSeries is composed of the following SubSeries:
GSE118970
Defining UHRF1 Domains That Support Maintenance of Human Colon Cancer DNA Methylation and Oncogenic Properties [methylation]
GSE118971
Defining UHRF1 Domains That Support Maintenance of Human Colon Cancer DNA Methylation and Oncogenic Properties [expression]
Relations
BioProject
PRJNA487589
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE118972_RAW.tar
898.8 Mb
(http)
(custom)
TAR (of IDAT, TXT)
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|