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Status |
Public on Oct 01, 2018 |
Title |
Regulation of neuroregeneration by long noncoding RNAs |
Organism |
Mus musculus |
Experiment type |
Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing
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Summary |
This SuperSeries is composed of the SubSeries listed below.
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Overall design |
Refer to individual Series
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Citation(s) |
30401432 |
Submission date |
Sep 05, 2018 |
Last update date |
Mar 25, 2019 |
Contact name |
Igor Ulitsky |
E-mail(s) |
igor.ulitsky@weizmann.ac.il
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Organization name |
Weizmann Institute of Science
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Street address |
Hertzl St.
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City |
Rehovot |
ZIP/Postal code |
76100 |
Country |
Israel |
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Platforms (1) |
GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
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Samples (75)
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GSM3032314 |
DRG 1 day after sciatic nerve injury, rep1 |
GSM3032315 |
DRG 1 day after sciatic nerve injury, rep2 |
GSM3032316 |
DRG 1 day after sham operation, rep1 |
GSM3032317 |
DRG 1 day after sham operation, rep2 |
GSM3032318 |
DRG 1 day after sham operation, rep3 |
GSM3032319 |
DRG 4 days after sciatic nerve injury, rep1 |
GSM3032320 |
DRG 4 days after sciatic nerve injury, rep2 |
GSM3032321 |
DRG 4 days after sciatic nerve injury, rep3 |
GSM3032322 |
DRG 4 days after sham operation, rep1 |
GSM3032323 |
DRG 4 days after sham operation, rep3 |
GSM3032324 |
DRG 7 days after sciatic nerve injury, rep1 |
GSM3032325 |
DRG 7 days after sciatic nerve injury, rep2 |
GSM3032326 |
DRG 7 days after sciatic nerve injury, rep3 |
GSM3032327 |
DRG 7 days after sham operation, rep1 |
GSM3032328 |
DRG 7 days after sham operation, rep2 |
GSM3032329 |
DRG 7 days after sham operation, rep3 |
GSM3032330 |
Control siRNA, rep1 |
GSM3032331 |
Control siRNA, rep2 |
GSM3032332 |
Control siRNA, rep3 |
GSM3032333 |
Sox11 siRNA, rep1 |
GSM3032334 |
Atf3 siRNA, rep1 |
GSM3032335 |
Silc1 siRNA, rep1 |
GSM3032336 |
Silc1 siRNA, rep2 |
GSM3032337 |
Norris1 siRNA, rep1 |
GSM3032338 |
Norris1 siRNA, rep3 |
GSM3032339 |
WT brain 1 |
GSM3032340 |
WT brain 2 |
GSM3032341 |
WT brain 3 |
GSM3032342 |
WT brain 4 |
GSM3032343 |
WT brain 5 |
GSM3032344 |
Silc1 KO brain 1 |
GSM3032345 |
Silc1 KO brain 2 |
GSM3032346 |
Silc1 KO brain 3 |
GSM3032347 |
Silc1 KO brain 4 |
GSM3032348 |
Silc1 KO brain 5 |
GSM3032349 |
DRG WT injury day 4 1 |
GSM3032350 |
DRG WT injury day 4 2 |
GSM3032351 |
DRG WT injury day 4 3 |
GSM3032352 |
DRG WT injury day 4 5 |
GSM3032353 |
DRG WT sham day 4 2 |
GSM3032354 |
DRG WT sham day 4 3 |
GSM3032355 |
DRG WT sham day 4 5 |
GSM3032356 |
DRG Silc1 KO injury day 4 1 |
GSM3032357 |
DRG Silc1 KO injury day 4 2 |
GSM3032358 |
DRG Silc1 KO injury day 4 3 |
GSM3032359 |
DRG Silc1 KO injury day 4 4 |
GSM3032360 |
DRG Silc1 KO injury day 4 5 |
GSM3032361 |
DRG Silc1 KO sham day 4 1 |
GSM3032362 |
DRG Silc1 KO sham day 4 2 |
GSM3032363 |
DRG Silc1 KO sham day 4 3 |
GSM3032364 |
DRG Silc1 KO sham day 4 4 |
GSM3032365 |
DRG Silc1 KO sham day 4 5 |
GSM3032366 |
DRG WT injury day 7 1 |
GSM3032367 |
DRG WT injury day 7 2 |
GSM3032368 |
DRG WT sham day 7 1 |
GSM3032369 |
DRG WT sham day 7 2 |
GSM3032370 |
DRG Silc1 KO injury day 7 1 |
GSM3032371 |
DRG Silc1 KO injury day 7 2 |
GSM3032372 |
DRG Silc1 KO sham day 7 1 |
GSM3032373 |
DRG Silc1 KO sham day 7 2 |
GSM3375592 |
Silc1-/-, injury, rep1 |
GSM3375593 |
Silc1-/-, injury, rep2 |
GSM3375594 |
Silc1-/-, injury, rep3 |
GSM3375595 |
Silc1-/-, sham, rep1 |
GSM3375596 |
Silc1-/-, sham, rep2 |
GSM3375597 |
Silc1-/-, sham, rep3 |
GSM3375598 |
Silc1+/+, injury, rep1 |
GSM3375599 |
Silc1+/+, injury, rep2 |
GSM3375600 |
Silc1+/+, injury, rep3 |
GSM3375601 |
Silc1+/+, sham, rep1 |
GSM3375602 |
Silc1+/+, sham, rep2 |
GSM3375603 |
Silc1+/+, sham, rep3 |
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This SuperSeries is composed of the following SubSeries: |
GSE111497 |
Regulation of neuroregeneration by long noncoding RNAs [RNA-seq] |
GSE119489 |
Regulation of neuroregeneration by long noncoding RNAs [ATAC-seq] |
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Relations |
BioProject |
PRJNA489382 |
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