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GEO accession:
Series GSE119597
Query DataSets for GSE119597
Status
Public on Mar 01, 2019
Title
Precise Gene Editing Preserves Hematopoietic Stem Cell Function Following Transient p53-Mediate DNA Damage Response
Organism
Homo sapiens
Experiment type
Expression profiling by high throughput sequencing
Other
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
30905619
Submission date
Sep 06, 2018
Last update date
May 02, 2019
Contact name
Ivan Merelli
E-mail(s)
ivan.merelli@itb.cnr.it
Phone
+390226422600
Organization name
Consiglio Nazionale delle Ricerche
Department
Istituto di Tecnologie Biomediche
Lab
Bioinformatics
Street address
via F.lli Cervi 93
City
Segrate
State/province
Milano
ZIP/Postal code
20090
Country
Italy
Platforms (2)
GPL15520
Illumina MiSeq (Homo sapiens)
GPL18573
Illumina NextSeq 500 (Homo sapiens)
Samples (44)
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GSM3377925
A plus DSB IL2RG (repl. 1)
GSM3377926
B minus DSB (repl. 1)
GSM3377927
C plus DSB AAVS1 (repl. 1)
GSM3377928
D plus DSB IL2RG (repl. 2)
GSM3377929
E minus DSB (repl. 2)
GSM3377930
F plus DSB AAVS1 (repl. 2)
GSM3377931
G plus DSB IL2RG (repl. 3)
GSM3377932
H minus DSB (repl. 3)
GSM3377933
I plus DSB AAVS1 (repl. 3)
GSM3377934
1 plus DSB IL2RG (repl. 1)
GSM3377935
2 minus DSB (repl. 1)
GSM3377936
3 plus DSB AAVS1 (repl. 1)
GSM3377937
4 plus DSB IL2RG (repl. 2)
GSM3377938
5 minus DSB (repl. 2)
GSM3377939
6 plus DSB AAVS1 (repl. 2)
GSM3377940
7 plus DSB IL2RG (repl. 3)
GSM3377941
8 minus DSB (repl. 3)
GSM3377942
9 plus DSB AAVS1 (repl. 3)
GSM3378054
HS/AAV6 GFP-
GSM3378055
HS/AAV6 GFP+
GSM3378056
HS RNP
GSM3378057
LS RNP
GSM3378058
minus DSB (RNP)
GSM3378059
ZFN
GSM3591855
InVitroA
GSM3591856
InVitroB
GSM3591857
MouseA0
GSM3591858
MouseA2
GSM3591859
MouseA3
GSM3591860
MouseA4
GSM3591861
MouseB0
GSM3591862
MouseB1
GSM3591863
MouseB2
GSM3591864
MouseB3
GSM3591865
MouseB4
GSM3592471
HS RNP AAVS1 edited cells from donor A
GSM3592472
HS RNP AAVS1 edited cells from donor B
GSM3592473
HS RNP AAVS1 edited cells from donor C
GSM3592474
HS RNP AAVS1 edited cells from donor A + GSE56
GSM3592475
HS RNP AAVS1 edited cells from donor B + GSE56
GSM3592476
HS RNP AAVS1 edited cells from donor C + GSE56
GSM3592477
Untreated cells (sole elctroporation) from donor A
GSM3592478
Untreated cells (sole elctroporation) from donor B
GSM3592479
Untreated cells (sole elctroporation) from donor C
This SuperSeries is composed of the following SubSeries:
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GSE119584
Precise Gene Editing Preserves Hematopoietic Stem Cell Function Following Transient p53-Mediate DNA Damage Response [bulk RNA-seq]
GSE119594
Precise Gene Editing Preserves Hematopoietic Stem Cell Function Following Transient p53-Mediate DNA Damage Response [scRNA-seq]
GSE126120
Precise Gene Editing Preserves Hematopoietic Stem Cell Function Following Transient p53-Mediate DNA Damage Response [Amplicon-seq]
GSE126163
Precise Gene Editing Preserves Hematopoietic Stem Cell Function Following Transient p53-Mediate DNA Damage Response [Clear-seq]
Relations
BioProject
PRJNA489682
Download family
Format
SOFT formatted family file(s)
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Supplementary file
Size
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File type/resource
GSE119597_RAW.tar
131.9 Mb
(http)
(custom)
TAR (of MTX, TSV)
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