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GEO accession:
Series GSE119943
Query DataSets for GSE119943
Status
Public on Apr 16, 2019
Title
Single-Cell Transcriptomics Identifies TOX as a Key Transcriptional Regulator of Progenitor-Like CD8 T Cells in Chronic Infection
Organism
Mus musculus
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
31209400
Submission date
Sep 13, 2018
Last update date
Jul 03, 2019
Contact name
Tuoqi Wu
E-mail(s)
tuoqiwu@gmail.com
Organization name
National Institute of Allergy and Infectious Diseases
Street address
49 Convent Dr.
City
Bethesda
State/province
MD
ZIP/Postal code
20892
Country
USA
Platforms (1)
GPL21493
Illumina HiSeq 3000 (Mus musculus)
Samples (60)
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GSM3388379
Chipseq_H3K27Ac_P14_Arm_D7_ShortLivedEffector_1
GSM3388380
Chipseq_H3K27Ac_P14_Arm_D7_ShortLivedEffector_2
GSM3388381
Chipseq_H3K27Ac_P14_Arm_D7_MemoryPrecursor_1
GSM3388382
Chipseq_H3K27Ac_P14_Arm_D7_MemoryPrecursor_2
GSM3388383
Chipseq_H3K27Ac_P14_Cl13_D7_TerminallyExhaused_1
GSM3388384
Chipseq_H3K27Ac_P14_Cl13_D7_TerminallyExhaused_2
GSM3388385
Chipseq_H3K27Ac_P14_Cl13_D7_ProgenitorLike_1
GSM3388386
Chipseq_H3K27Ac_P14_Cl13_D7_ProgenitorLike_2
GSM3388387
Chipseq_Input_P14_Arm_D7_ShortLivedEffector_1
GSM3388388
Chipseq_Input_P14_Arm_D7_ShortLivedEffector_2
GSM3388389
Chipseq_Input_P14_Arm_D7_MemoryPrecursor_1
GSM3388390
Chipseq_Input_P14_Arm_D7_MemoryPrecursor_2
GSM3388391
Chipseq_Input_P14_Cl13_D7_TerminallyExhaused_1
GSM3388392
Chipseq_Input_P14_Cl13_D7_TerminallyExhaused_2
GSM3388393
Chipseq_Input_P14_Cl13_D7_StemLike_1
GSM3388394
Chipseq_Input_P14_Cl13_D7_ProgenitorLike_2
GSM3388395
RNAseq_D7P14_pMIG_ProgenitorLike_1
GSM3388396
RNAseq_D7P14_pMIG_ProgenitorLike_2
GSM3388397
RNAseq_D7P14_pMIG_ProgenitorLike_3
GSM3388398
RNAseq_D7P14_pMIG_TerminallyExhausted_1
GSM3388399
RNAseq_D7P14_pMIG_TerminallyExhausted_2
GSM3388400
RNAseq_D7P14_pMIG_TerminallyExhausted_3
GSM3388401
RNAseq_D7P14_TOX_Over_ProgenitorLike_1
GSM3388402
RNAseq_D7P14_TOX_Over_ProgenitorLike_2
GSM3388403
RNAseq_D7P14_TOX_Over_ProgenitorLike_3
GSM3388404
RNAseq_D7P14_TOX_Over_TerminallyExhausted_1
GSM3388405
RNAseq_D7P14_TOX_Over_TerminallyExhausted_2
GSM3388406
RNAseq_D7P14_TOX_Over_TerminallyExhausted_3
GSM3568585
scRNA_D4.5_P14_Arm_1
GSM3568586
scRNA_D4.5_P14_Cl13_1
GSM3568587
scRNA_D7_P14_Arm_1
GSM3568588
scRNA_D7_P14_Cl13_1
GSM3568589
scRNA_D4.5_P14_Arm_2
GSM3568590
scRNA_D4.5_P14_Cl13_2
GSM3568591
scRNA_D7_P14_Arm_2
GSM3568592
scRNA_D7_P14_Cl13_2
GSM3568593
scRNA_D7_BMC_WT_GP33
GSM3568594
scRNA_D7_BMC_TOXKO_GP33
GSM3568595
RNAseq_D4.5_P14_Arm_1
GSM3568596
RNAseq_D4.5_P14_Arm_2
GSM3568597
RNAseq_D4.5_P14_Arm_3
GSM3568598
RNAseq_D4.5_P14_Cl13_1
GSM3568599
RNAseq_D4.5_P14_Cl13_2
GSM3568600
RNAseq_D4.5_P14_Cl13_3
GSM3568601
RNAseq_D7_P14_Arm_1
GSM3568602
RNAseq_D7_P14_Arm_2
GSM3568603
RNAseq_D7_P14_Arm_3
GSM3568604
RNAseq_D7_P14_Cl13_1
GSM3568605
RNAseq_D7_P14_Cl13_2
GSM3568606
RNAseq_D7_P14_Cl13_3
GSM3568607
RNAseq_D7_P14_Cl13_TerminallyExhausted_1
GSM3568608
RNAseq_D7_P14_Cl13_TerminallyExhausted_2
GSM3568609
RNAseq_D7_P14_Cl13_ProgenitorLike_1
GSM3568610
RNAseq_D7_P14_Cl13_ProgenitorLike_2
GSM3568611
RNAseq_D7_P14_Arm_ShortLivedEffector_1
GSM3568612
RNAseq_D7_P14_Arm_ShortLivedEffector_2
GSM3568613
RNAseq_D7_P14_Arm_ShortLivedEffector_3
GSM3568614
RNAseq_D7_P14_Arm_MemoryPrecursor_1
GSM3568615
RNAseq_D7_P14_Arm_MemoryPrecursor_2
GSM3568616
RNAseq_D7_P14_Arm_MemoryPrecursor_3
This SuperSeries is composed of the following SubSeries:
GSE119940
Single-Cell Transcriptomics Identifies TOX as a Key Transcriptional Regulator of Progenitor-Like CD8 T Cells in Chronic Infection [single-cell RNA-seq]
GSE119941
Single-Cell Transcriptomics Identifies TOX as a Key Transcriptional Regulator of Progenitor-Like CD8 T Cells in Chronic Infection [ChIP-seq]
GSE119942
Single-Cell Transcriptomics Identifies TOX as a Key Transcriptional Regulator of Progenitor-Like CD8 T Cells in Chronic Infection [RNA-seq]
Relations
BioProject
PRJNA490745
Download family
Format
SOFT formatted family file(s)
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TXT
Supplementary file
Size
Download
File type/resource
GSE119943_RAW.tar
673.8 Mb
(http)
(custom)
TAR (of BW, MTX, TSV)
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