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Series GSE119959 Query DataSets for GSE119959
Status Public on Sep 02, 2020
Title Analysis of off target generated by CRISPR/Cas9 in DM1 mutant haploid embryonic stem cells
Organism Mus musculus
Experiment type Other
Summary The androgenetic embryonic stem cells we generated carrying several genes mutations could be injected into the oocyte and produce the semi-cloned mice. Those semi-cloned mice could mimic several DM1-associated phenotypes. We try to identify if any off-target exist in those cells inducing by CRISPR/Cas9.
 
Overall design Examination of off target position in two cell lines.
 
Contributor(s) Li J, Yin Q
Citation(s) 31853004
Submission date Sep 14, 2018
Last update date Dec 02, 2020
Contact name Qing Li
E-mail(s) liqing2015@sibcb.ac.cn
Organization name Chinese Academy of Science
Department institute of biochemistry and cell biology
Lab Jinsong Li's Lab
Street address 320 Yueyang Road
City Shanghai
ZIP/Postal code 200031
Country China
 
Platforms (1)
GPL9185 Illumina Genome Analyzer (Mus musculus)
Samples (3)
GSM3389507 WT
GSM3389508 Dmpk;Six5;Mbnl1-KO
GSM3389509 Dmpk;Six5;Mbnl1;Dmwd-KO
Relations
BioProject PRJNA490829
SRA SRP161749

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE119959_BC171182-1.anno.vcf_exonic.snv.txt.gz 346.9 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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