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Series GSE12028 Query DataSets for GSE12028
Status Public on Jul 10, 2008
Title Modulation of colon inflammation in interleukin-10 gene-deficient mice via dietary polyunsaturated fatty acid
Organism Mus musculus
Experiment type Expression profiling by array
Summary Dietary n-3 polyunsaturated fatty acids can reduce inflammation via a range of mechanisms. This study tested the effect of dietary eicosapentaenoic acid (EPA) on intestinal inflammation using interleukin-10 gene-deficient (Il10-/-) mice. Methods: At 35 days of age, 12 weaned Il10-/- and 12 C57 mice were randomly assigned to one of two modified AIN-76A diets, supplemented with 3.7% purified ethyl esters of either EPA (n-3) or oleic acid (OA, control). To identify genes relevant to colon inflammation, transcription profiling (microarrays and qRT-PCR) and bioinformatic analyses were used. Results: In this study, dietary EPA reversed the decrease in colon fatty acid β-oxidation gene expression observed in OA-fed Il10-/- compared to C57 mice. Il10-/- mice fed the OA diet showed decreased expression of antioxidant enzyme genes, as well as those involved in detoxification of xenobiotics, compared to C57 mice on the same diet. In contrast, dietary EPA increased the expression of these genes in Il10-/- mice. Conclusions: These data indicate that dietary EPA induced endogenous lipid oxidation which might have a potential anti-inflammatory effect on colon tissue. This is supported by the activation of the Ppara gene that regulates the expression of pro-inflammatory and immunomodulatory genes and proteins.
 
Overall design The diet abbreviations EPA, OA, AA and CO used in the sample records
refer to the following :

CO : AIN-76A (control)
OA : AIN-76A (fat-free) + 1% corn oil + 3.7% oleic acid
EPA : AIN-76A (fat-free) + 1% corn oil + 3.7% eicosapentaenoic acid
AA : AIN-76A (fat-free) + 1% corn oil + 3.7% arachidonic acid

Corn oil was supplemented with purified linoleic and alpha-linolenic acid to meet the nutritional requirements of mice for these essential fatty acids. Diets fed for 6 weeks.
 
Contributor(s) Knoch B
Citation(s) 20440721
Submission date Jul 07, 2008
Last update date Dec 06, 2012
Contact name Alan Francis McCulloch
E-mail(s) alan.mcculloch@agresearch.co.nz
Phone 64 3 4899080
Organization name AgResearch NZ
Street address Invermay
City Puddle Alley
State/province Mosgiel
ZIP/Postal code n/a
Country New Zealand
 
Platforms (1)
GPL2872 Agilent-012694 Whole Mouse Genome G4122A (Feature Number version)
Samples (16)
GSM303588 C57 mice AA diet colon tissue (Pool 1)
GSM304030 C57 mice AA diet colon tissue (Pool 2)
GSM304042 IL10-/- mice AA diet colon tissue (Pool 1)
Relations
BioProject PRJNA113305

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE12028_RAW.tar 6.2 Mb (http)(custom) TAR
Processed data included within Sample table

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