|
| Status |
Public on Sep 27, 2018 |
| Title |
TERT Promoter DNA methylation landscape in human cancer cell lines and tumors |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We assessed methylation landscape near the human TERT promoter in various normal samples and tumor samples, to assess the unique hypermethylation phenotype that exist in human cancers
|
| |
|
| Overall design |
DNA from various tissues (i.e. human cancer cell lines, normal cells, and tumor tissue) were extracted and analyzed with bisulfite targeted sequencing of the TERT promoter
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| |
|
| Contributor(s) |
Lee D, Komosa M, Tabori U |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| Submission date |
Sep 26, 2018 |
| Last update date |
Mar 27, 2019 |
| Contact name |
Donghyun Lee |
| E-mail(s) |
dave.lee@sickkids.ca
|
| Organization name |
The Hospital for Sick Children
|
| Department |
Genetics and Genome Biology
|
| Lab |
Laboratory of Dr. Uri Tabori
|
| Street address |
686 Bay Street
|
| City |
Toronto |
| State/province |
Ontario |
| ZIP/Postal code |
M5G0A4 |
| Country |
Canada |
| |
|
| Platforms (2) |
| GPL15520 |
Illumina MiSeq (Homo sapiens) |
| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
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| Samples (129)
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|
| Relations |
| BioProject |
PRJNA493239 |
| SRA |
SRP162665 |
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