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Series GSE120579 Query DataSets for GSE120579
Status Public on Nov 15, 2018
Title TNF response in promyelocytic and granulocytic forms of HL60/S4 cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary The human promyelocytic cell line HL60/S4 can be differentiated into a granulocytic form with the addition of all-trans retinoic acid for 4 days. We investigated the conserved and differentiated responses to TNF in the granulocytic and promyelocytic forms of HL60/S4 cells.
 
Overall design Promyeloytic and granulocytic HL60/S4 cells were treated with 16ng/ml TNF or equivalent volume of vehicle (water) in calcium supplemented growth media for two hours, then RNA was extracted with Trizol LS and the Qiagen Rneasy mini kit.
 
Contributor(s) Jacobson E, O'Sullivan J
Citation(s) 31263060
Submission date Sep 27, 2018
Last update date Aug 21, 2019
Contact name Justin M. O'Sullivan
E-mail(s) justin.osullivan@auckland.ac.nz
Organization name University of Auckland
Department Liggins Institute
Street address 85 Park Road, Grafton
City Auckland
ZIP/Postal code 1023
Country New Zealand
 
Platforms (1)
GPL20795 HiSeq X Ten (Homo sapiens)
Samples (12)
GSM3403662 pro_1
GSM3403663 pro_2
GSM3403664 pro_3
Relations
BioProject PRJNA493630
SRA SRP162760

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE120579_TNF_genes.txt.gz 5.0 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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