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Series GSE120685 Query DataSets for GSE120685
Status Public on Sep 28, 2021
Title The Role of the RNA-binding protein HuR in MPNST growth and metastasis [RNA-seq]
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Oncogenic gene expression programs are essential for the development and maintenance of the cancer phenotype. An emerging view is that cancer cells can develop a strong addiction to discrete molecular regulators that control these aberrant transcription programs, making these attractive targets for effective and enduring therapies. Here, we identify the RNA-binding protein HuR as a central oncogenic driver for Malignant peripheral nerve sheath tumours (MPNSTs), which are highly aggressive sarcomas that originate from cells of the Schwann cell lineage. These neoplasms are strongly metastatic, resistant to radio-and chemotherapy and are typically fatal with no effective treatment. We find that HuR is highly elevated and binds to a multitude of cancer-associated transcripts in human MPNST samples. HuR inhibition has potent cytostatic and cytotoxic effects on tumour growth, and strongly supresses their metastatic capacity in vivo. Importantly, we find that the profound anti-tumorigenic effects of HuR stems from its unique ability to regulate multiple key oncogenic signals that ultimately converge on highly intricate transcription regulatory networks that coordinate the core biological capabilities of MPNST cells. The exceptional dependency on HuR thus confers a competitive advantage to MPNST cells for their survival, proliferation and dissemination, representing an ideal target that could be exploited for MPNST treatment.
 
Overall design Gene expression changes after HuR silencing in MPNST cell line ST88-14
 
Contributor(s) Woodhoo A, Lavin JL
Citation(s) 32315290
Submission date Oct 01, 2018
Last update date Sep 28, 2021
Contact name Jose Luis Lavin
E-mail(s) joluito@gmail.com
Organization name CIC bioGUNE
Street address Parque Tecnológico de Bizkaia Building 502, Floor 0
City Derio
State/province Bizkaia
ZIP/Postal code 48160
Country Spain
 
Platforms (1)
GPL15456 Illumina HiScanSQ (Homo sapiens)
Samples (6)
GSM3408254 RNA-seq_MPNST cell ST88-14 number 1 sh Ctr
GSM3408255 RNA-seq_MPNST cell ST88-14 number 2 sh Ctr
GSM3408256 RNA-seq_MPNST cell ST88-14 number 3 sh Ctr
This SubSeries is part of SuperSeries:
GSE120687 The Role of the RNA-binding protein HuR in MPNST growth and metastasis
Relations
BioProject PRJNA494146
SRA SRP163004

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Supplementary file Size Download File type/resource
GSE120685_shHuR3_vs_shCtrl_CountsxGene.txt.gz 845.7 Kb (ftp)(http) TXT
GSE120685_shHuR3_vs_shCtrl_CountsxIsoform.txt.gz 3.1 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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