|
| Status |
Public on May 14, 2019 |
| Title |
Acute depletion of CTCF directly affects MYC regulation through loss of enhancer–promoter looping |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Myc is a family of regulator genes and proto-oncogenes that code for transcription factors. Gene expression of CTCF in human cancer cells and control uncover the disrupted enhancer-promoter regulation of MYC in human cancer cells.
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| |
|
| Overall design |
RNA-seq library constructed on genome wide deletion of CTCF cells and control.
|
| |
|
| Contributor(s) |
Hyle J, Zhang Y, Wright S, Li C |
| Citation(s) |
33001025 |
| Submission date |
Oct 03, 2018 |
| Last update date |
May 17, 2021 |
| Contact name |
Chunliang Li |
| E-mail(s) |
Chunliang.Li@STJUDE.ORG
|
| Organization name |
St.Jude Children's Research Hospital
|
| Street address |
262 Danny Thomas Place
|
| City |
Memphis |
| State/province |
TN |
| ZIP/Postal code |
38105 |
| Country |
USA |
| |
|
| Platforms (1) |
|
| Samples (19)
|
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| This SubSeries is part of SuperSeries: |
| GSE174528 |
SuperSeries Acute depletion of CTCF directly affects MYC regulation through loss of enhancer–promoter looping |
|
| Relations |
| BioProject |
PRJNA494510 |
| SRA |
SRP163222 |
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