NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE12111 Query DataSets for GSE12111
Status Public on Jul 14, 2009
Title IKKα Is Required to Maintain Skin Homeostasis and Prevent Skin Cancer
Organism Mus musculus
Experiment type Expression profiling by array
Summary It has long been known that excessive mitotic activity due to H-Ras can block keratinocyte differentiation and cause skin cancer. It is not clear, however, whether there are any innate surveillants that ensure keratinocytes undergoing terminal differentiation, preventing the disease. IKKα induces keratinocyte terminal differentiation and its reduction promotes skin tumor development. However, its nature function in skin cancer is unknown. Here we found that mice with IKKα deletion in keratinocytes or in hair follicle keratinocytes developed a thickened epidermis and spontaneous squamous cell-like carcinomas. Inactivation of epidermal growth factor receptor (EGFR) or reintroduction of IKKα inhibited excessive mitosis, induced terminal differentiation, and prevented skin cancer through an EGFR-driven autocrine loop in mice. Thus, IKKα serves as an innate surveillant.
 
Overall design The differences in gene expression profiles of CHUK deleted mouse keratinocytes compared to wild type mouse keratinocytes were analyzed using two dual-channel agilent microarrays in duplicates.
 
Contributor(s) Liu B, Xia X, Zhu F, Park E, Carbaj S, Kiguchi K, DiGiovanni J, Fischer S, Hu Y
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jul 14, 2008
Last update date May 10, 2018
Contact name Yinling Hu
E-mail(s) yhu@mdanderson.org
Phone 512-237 9338
Fax 512-237 2475
Organization name UT M.D.Andreson Cancer Center
Department Carcinogenesis
Lab 3
Street address 1808 Park Road 1C
City Smithville
State/province TX
ZIP/Postal code 78957
Country USA
 
Platforms (1)
GPL4134 Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Feature Number version)
Samples (2)
GSM305472 Wild Type Keratinocyte vs CHUK-LoxP Mutant Keratinocyte_rep1
GSM305473 Wild Type Keratinocyte vs CHUK-LoxP Mutant Keratinocyte_rep2
Relations
BioProject PRJNA113807

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE12111_RAW.tar 32.7 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap