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Series GSE121920 Query DataSets for GSE121920
Status Public on Feb 17, 2020
Title Loss of mitochondrial proline catabolism depletes FAD, impairing sperm function, and male reproductive advantage
Organism Caenorhabditis elegans
Experiment type Expression profiling by high throughput sequencing
Summary Exposure to environmental stress has a clinically established influence on male reproductive health, but the impact of normal cellular metabolism on sperm quality and function is less well-defined. Here we show that homeostatic changes in mitochondrial dynamics driven by defective mitochondrial proline catabolism result in pleiotropic consequences on sperm quality and competitive fitness. Disruption of alh-6, which converts 1-pyrroline-5-carboxylate (P5C) to glutamate, results in P5C accumulation that drives oxidative stress, activation of the cytoprotective transcription factor SKN-1, and a reduction of energy-storing flavin adenine dinucleotide (FAD) levels. These molecular changes lead to premature male reproductive senescence by reducing sperm quality. These sperm-specific defects are suppressed by abating P5C metabolism, by treatment with antioxidants to combat reactive oxygen species (ROS), or by feeding diets that restore FAD levels. Our results define a role for mitochondrial proline catabolism and FAD homeostasis on sperm function and specify strategies to pharmacologically reverse unintended outcomes from SKN-1/Nrf transcriptional activation.
 
Overall design Our study aim to look at transcriptional signatures that define the physiological changes in alh-6 mutant animals as young and old animals. 12 RNA samples in total are turned in for high-throughput sequencing. N2 (WT) and lax105 (alh-6) worms are collected in triplicates at two time points: L4 and day 3 adults.
 
Contributor(s) Yen C, Curran S
Citation(s) 32022684
Submission date Oct 29, 2018
Last update date Mar 03, 2020
Contact name Sean Curran
E-mail(s) spcurran@usc.edu
Organization name University of Southern California
Department Davis School of Gerontology
Lab Curran
Street address 3715 McClintock Ave
City Los Angeles
State/province CA
ZIP/Postal code 90089
Country USA
 
Platforms (1)
GPL13657 Illumina HiSeq 2000 (Caenorhabditis elegans)
Samples (12)
GSM3449975 WT L4 rep 1
GSM3449976 WT L4 rep 2
GSM3449977 WT L4 rep 3
Relations
BioProject PRJNA499069
SRA SRP167129

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE121920_fpkm.txt.gz 1.4 Mb (ftp)(http) TXT
GSE121920_s105_D3vsN2_D3.Differential_analysis_results.xls.gz 571.6 Kb (ftp)(http) XLS
GSE121920_s105_L4vsN2_L4.Differential_analysis_results.xls.gz 654.4 Kb (ftp)(http) XLS
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Processed data are available on Series record

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