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Series GSE12206 Query DataSets for GSE12206
Status Public on Jul 23, 2008
Title Genome-wide analysis of mechano-responsive gene expression by tenocytes in fascicles subjected to cyclic tensile strain
Organism Rattus norvegicus
Experiment type Expression profiling by array
Summary Analysis of mechano-regulation of tenocyte metabolism at gene expression level. The hypothesis tested in the present study was that cyclic tensile strain influence the balance of anabolism/catabolism of tenocytes. Results provide important information of the response of tenocyte to cyclic tensile strain, such as specific mechano-responsive genes, up- or down-regulated specific anabolic/catabolic cellular functions.

Keywords: gene expression array-based, stress response, functional analysis
 
Overall design Total RNA obtained from isolated tendon fascicles subjected to 1 or 24 hours in vitro cyclic tensile strain was analysed in triplicate by comparison with unstrained control fascicles. A total of 12 RNA samples were analysed (3 samples each from strained and unstrained group at each time point).
 
Contributor(s) Fleischmann C, Mein CA, Lee DA
Citation(s) 20497018
Submission date Jul 22, 2008
Last update date Jul 29, 2014
Contact name Eijiro Maeda
E-mail(s) e.maeda@qmul.ac.uk
Organization name Queen Mary, University of London
Department Engineering
Lab Cell and Tissue Engineering
Street address Mile End Road
City London
ZIP/Postal code E1 4NS
Country United Kingdom
 
Platforms (1)
GPL6101 Illumina ratRef-12 v1.0 expression beadchip
Samples (12)
GSM307098 Fascicle Strained 24h rep1
GSM307099 Fascicle Unstrained 24h rep1
GSM307100 Fascicle Strained 24h rep2
Relations
BioProject PRJNA113437

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE12206_RAW.tar 2.8 Mb (http)(custom) TAR
GSE12206_raw_data.txt 3.1 Mb (ftp)(http) TXT
Processed data included within Sample table

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