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Series GSE122126 Query DataSets for GSE122126
Status Public on Nov 04, 2018
Title Comprehensive human cell-type methylation atlas reveals origins of circulating cell-free DNA in health and disease
Organism Homo sapiens
Experiment type Methylation profiling by array
Summary Genome wide DNA methylation profiling of 59 cfDNA samples, 27 isolated cell populations used in deconvolution of cfDNA samples, and 15 samples used as technical controls.
 
Overall design Bisulphite converted DNA from the 48 samples were hybridised either to the Illumina 450K array or the Illumina EPIC array.
 
Contributor(s) Moss J, Kaplan T, Dor Y
Citation(s) 30498206
Submission date Nov 04, 2018
Last update date Aug 26, 2020
Contact name Joshua Moss
E-mail(s) joshua.moss@mail.huji.ac.il
Organization name Hebrew University of Jerusalem
Department Developmental Biology and Cancer Research
Street address Faculty of Medicine, The Hebrew University of Jerusalem, Ein Kerem
City Jerusalem
ZIP/Postal code 9112102
Country Israel
 
Platforms (2)
GPL13534 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
GPL21145 Infinium MethylationEPIC
Samples (101)
GSM3455765 pancreatic_beta_cells_rep1
GSM3455766 pancreatic_beta_cells_rep2
GSM3455767 pancreatic_beta_cells_rep3
Relations
BioProject PRJNA503732

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE122126_RAW.tar 1.7 Gb (http)(custom) TAR (of IDAT)
Processed data included within Sample table
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