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Series GSE123559 Query DataSets for GSE123559
Status Public on Nov 04, 2019
Title Ectopic expression of the homeobox gene Cdx2 in the epiblast
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary This dataset describes the transcriptomic profiling by mRNA-seq of head tissues of E10.5 control or ectopically Cdx2-expressing embryos. Each condition was analyzed in 3 heads to address the role of Cdx2 in embryonic axis determination.
 
Overall design Embryonic head samples (E10.5) from control mice and mice engineered for inducible expression of Cdx2 in the anterior epiblast at gastrulation were tested by RNASeq (3 embryos for each condition), resulting in a total of 6 samples. The pregnant females were intraperitoneally injected once with Tamoxifen at 2mg in corn oil at day 6.5 post coitum.
 
Contributor(s) Duluc I, Freund J
Citation(s) 31649239
Submission date Dec 10, 2018
Last update date Nov 04, 2019
Contact name Victor GOURAIN
Organization name Centre de recherche en transplantation et immunologie
Department UMR1064
Street address 30 Bd Jean Monnet
City Nantes
ZIP/Postal code 44093
Country France
 
Platforms (1)
GPL18480 Illumina HiSeq 1500 (Mus musculus)
Samples (6)
GSM3507130 head Sox2CreERT2, 1
GSM3507131 head WT
GSM3507132 head Sox2CreERT2, 2
Relations
BioProject PRJNA509220
SRA SRP173232

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE123559_RAW.tar 1.1 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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