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Series GSE128784 Query DataSets for GSE128784
Status Public on Oct 25, 2019
Title Dicer sequencing, whole genome methylation profiling and RNA sequencing analysis in basal cell carcinoma [methylation]
Organism Homo sapiens
Experiment type Methylation profiling by array
Summary Whole genome methylation profiling performed with Infinium MethylationEPIC BeadChips as well as RNA and smallRNA sequencing were performed in 5 sBCCs with the Illumina NextSeq500 next generation sequencing system.
 
Overall design Basal cell carcinoma biopsy DNA methylation
 
Contributor(s) Sand M, Bromba A, Sand D, Gambichler T, Hessam S, Becker JC, Stockfleth E, Meyer T, Bechara FG
Citation(s) 31647206
Submission date Mar 25, 2019
Last update date Oct 28, 2019
Contact name Michael Sand
Organization name Ruhr-University Bochum
Department Depatment of Dermatology, Venereology and Allergology
Street address Gudrunstr. 56
City Bochum
State/province NRW
ZIP/Postal code 44791
Country Germany
 
Platforms (1)
GPL21145 Infinium MethylationEPIC
Samples (5)
GSM3684914 BCC 10 DNA methylation
GSM3684915 BCC 11 DNA methylation
GSM3684916 BCC 12 DNA methylation
This SubSeries is part of SuperSeries:
GSE128795 Dicer sequencing, whole genome methylation profiling and RNA sequencing analysis in basal cell carcinoma
Relations
BioProject PRJNA528892

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE128784_Methylation_Profiling_Supplementary_Material_II.xlsx 103.5 Mb (ftp)(http) XLSX
GSE128784_RAW.tar 231.7 Mb (http)(custom) TAR (of IDAT)
Processed data included within Sample table
Processed data are available on Series record

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